Difference between revisions of "RXN-4209"

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(Created page with "Category:Gene == Gene Ec-21_005910 == * left end position: ** 6816528 * transcription direction: ** POSITIVE * right end position: ** 6823667 * centisome position: ** 92.3...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4209 RXN-4209] == * direction: ** LEFT-TO-RIGHT * common name: ** Fatty acid hydroxylase * ec n...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-21_005910 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4209 RXN-4209] ==
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* left end position:
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* direction:
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** 6816528
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** Fatty acid hydroxylase
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* right end position:
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* ec number:
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** 6823667
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** [http://enzyme.expasy.org/EC/1.14.19.20 EC-1.14.19.20]
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* centisome position:
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** 92.36339   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0014_0115
 
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** Esi0014_0115
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 2 [[PROTON]][c] '''+''' 1 [[CPD-4125]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[CPD-4126]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c]
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***go-term
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* With common name(s):
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== Pathways associated ==
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** 2 H+[c] '''+''' 1 avenasterol[c] '''+''' 2 a ferrocytochrome b5[c] '''+''' 1 oxygen[c] '''=>''' 2 H2O[c] '''+''' 1 5-dehydroavenasterol[c] '''+''' 2 a ferricytochrome b5[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-01_003780]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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== Pathways ==
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* [[PWY-2541]], plant sterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541]
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** '''10''' reactions found over '''36''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=6816528}}
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* LIGAND-RXN:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07486 R07486]
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{{#set: right end position=6823667}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=92.36339    }}
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{{#set: common name=Fatty acid hydroxylase}}
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{{#set: common name=Esi_0014_0115|Esi0014_0115}}
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{{#set: ec number=EC-1.14.19.20}}
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{{#set: reaction associated=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}}
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{{#set: gene associated=Ec-01_003780}}
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{{#set: in pathway=PWY-2541}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:30, 21 March 2018

Reaction RXN-4209

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Fatty acid hydroxylase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-2541, plant sterol biosynthesis: PWY-2541
    • 10 reactions found over 36 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-4209&oldid=27345"