Difference between revisions of "RXN-7828"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5114 RXN0-5114] == * direction: ** LEFT-TO-RIGHT * common name: ** HAD-like domain * ec number...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7828 RXN-7828] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5114 RXN0-5114] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7828 RXN-7828] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** HAD-like domain
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.3.3 EC-3.1.3.3]
+
** [http://enzyme.expasy.org/EC/2.4.1 EC-2.4.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[3-P-SERINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[SER]][c] '''+''' 1 [[Pi]][c]
+
** 1 [[CPD-12575]][c] '''+''' 1 [[PELARGONIDIN-3-GLUCOSIDE-CMPD]][c] '''=>''' 1 [[CPD-7137]][c] '''+''' 1 [[UDP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 3-phospho-L-serine[c] '''+''' 1 H2O[c] '''=>''' 1 L-serine[c] '''+''' 1 phosphate[c]
+
** 1 UDP-α-D-glucose[c] '''+''' 1 pelargonidin-3-O-β-D-glucoside[c] '''=>''' 1 pelargonidin-3,5-di-O-β-D-glucoside[c] '''+''' 1 UDP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-18_001570]]
+
* Gene: [[Ec-04_004610]]
−
** ESILICULOSUS_GENOME
+
** Source: [[orthology-aragem]]
−
***EC-NUMBER
+
* Gene: [[Ec-28_003310]]
−
** [[pantograph]]-[[aragem]]
+
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-14_000870]]
 +
** Source: [[orthology-aragem]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[SERSYN-PWY]], L-serine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=SERSYN-PWY SERSYN-PWY]
+
* [[PWY-5268]], salvianin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5268 PWY-5268]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5139]], pelargonidin conjugates biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5139 PWY-5139]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-aragem]]
−
*** [[aragem]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21208 21208]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00582 R00582]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=HAD-like domain}}
+
{{#set: ec number=EC-2.4.1}}
−
{{#set: ec number=EC-3.1.3.3}}
+
{{#set: gene associated=Ec-04_004610|Ec-28_003310|Ec-14_000870}}
−
{{#set: gene associated=Ec-18_001570}}
+
{{#set: in pathway=PWY-5268|PWY-5139}}
−
{{#set: in pathway=SERSYN-PWY}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-aragem}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=aragem}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 20:30, 21 March 2018

Reaction RXN-7828

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5268, salvianin biosynthesis: PWY-5268
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-5139, pelargonidin conjugates biosynthesis: PWY-5139
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-7828&oldid=27413"