Difference between revisions of "ALLANTOICASE-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-330...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALLANTOICASE-RXN ALLANTOICASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** allantoicase...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALLANTOICASE-RXN ALLANTOICASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** indole-3-acetate biosynthesis II
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** allantoicase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.5.3.4 EC-3.5.3.4]
 
* Synonym(s):
 
* Synonym(s):
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** auxin biosynthesis
 
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** indole-3-acetic acid biosynthesis
 
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** IAA de novo synthesis
 
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** IAA biosynthesis II
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''2''' reaction(s) found
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* With identifiers:
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** [[RXNN-404]]
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** 1 [[ALLANTOATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[UREA]][c] '''+''' 1 [[CPD-1091]][c]
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** [[RXN-1404]]
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* With common name(s):
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== Reaction(s) not found ==
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** 1 allantoate[c] '''+''' 1 H2O[c] '''=>''' 1 urea[c] '''+''' 1 S-ureidoglycolate[c]
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* '''12''' reaction(s) not found
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** [http://metacyc.org/META/NEW-IMAGE?object=AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN]
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== Genes associated with this reaction  ==
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12063 RXN-12063]
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Genes have been associated with this reaction based on different elements listed below.
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12061 RXN-12061]
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* Gene: [[Ec-06_010130]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-7567 RXN-7567]
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** Source: [[annotation-esiliculosus_genome]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXNDQC-2 RXNDQC-2]
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*** Assignment: GO-TERM
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** [http://metacyc.org/META/NEW-IMAGE?object=TRYPTOPHAN-AMINOTRANSFERASE-RXN TRYPTOPHAN-AMINOTRANSFERASE-RXN]
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== Pathways  ==
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-1403 RXN-1403]
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* [[PWY-5697]], allantoin degradation to ureidoglycolate I (urea producing): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5697 PWY-5697]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12064 RXN-12064]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-1406 RXN-1406]
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== Reconstruction information  ==
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-12062 RXN-12062]
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* Category: [[annotation]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-10139 RXN-10139]
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** Source: [[annotation-esiliculosus_genome]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-1405 RXN-1405]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PLANTCYC : PWY-581
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* RHEA:
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* ARACYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11016 11016]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-581 PWY-581]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02422 R02422]
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{{#set: common name=indole-3-acetate biosynthesis II}}
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* UNIPROT:
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{{#set: common name=auxin biosynthesis|indole-3-acetic acid biosynthesis|IAA de novo synthesis|IAA biosynthesis II}}
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** [http://www.uniprot.org/uniprot/P18407 P18407]
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{{#set: reaction found=2}}
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** [http://www.uniprot.org/uniprot/P25335 P25335]
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{{#set: reaction not found=12}}
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** [http://www.uniprot.org/uniprot/Q09913 Q09913]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=allantoicase}}
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{{#set: ec number=EC-3.5.3.4}}
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{{#set: gene associated=Ec-06_010130}}
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{{#set: in pathway=PWY-5697}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:30, 21 March 2018

Reaction ALLANTOICASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • allantoicase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 allantoate[c] + 1 H2O[c] => 1 urea[c] + 1 S-ureidoglycolate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5697, allantoin degradation to ureidoglycolate I (urea producing): PWY-5697
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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