Difference between revisions of "Ec-19 002750"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10059 RXN-10059] == * direction: ** LEFT-TO-RIGHT * common name: ** Beta-ketoacyl synthase, N-t...")
 
(Created page with "Category:Gene == Gene Ec-19_002750 == * left end position: ** 3042016 * transcription direction: ** NEGATIVE * right end position: ** 3047279 * centisome position: ** 50.9...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10059 RXN-10059] ==
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== Gene Ec-19_002750 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3042016
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* common name:
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* transcription direction:
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** Beta-ketoacyl synthase, N-terminal
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** NEGATIVE
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** beta-ketoacyl synthase, partial
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* right end position:
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** Thiolase-like, subgroup
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** 3047279
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** 3-oxoacyl-[acyl-carrier-protein] synthase
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* centisome position:
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* ec number:
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** 50.94917   
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
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* Synonym(s):
 
* Synonym(s):
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** Esi_0035_0121
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** Esi0035_0121
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[NARINGENIN-3-DIOXYGENASE-RXN]]
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** 1 [[Lignoceroyl-ACPs]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[3-oxo-cerotoyl-ACPs]][c] '''+''' 1 [[CO-A]][c]
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** Source: [[orthology-aragem]]
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* With common name(s):
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* Reaction: [[RXN-113]]
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** 1 a lignoceroyl-[acp][c] '''+''' 1 malonyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 a 3-oxo-cerotoyl-[acp][c] '''+''' 1 coenzyme A[c]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-115]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: ec-number
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* [[Ec-27_002090]]
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** Source: [[orthology-aragem]]
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** ESILICULOSUS_GENOME
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* Reaction: [[RXN-171]]
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***EC-NUMBER
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** Source: [[orthology-aragem]]
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* [[Ec-12_000640]]
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* Reaction: [[RXN-527]]
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** ESILICULOSUS_GENOME
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** Source: [[orthology-aragem]]
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***EC-NUMBER
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* Reaction: [[RXN-602]]
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* [[Ec-27_003480]]
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** Source: [[orthology-aragem]]
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** ESILICULOSUS_GENOME
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* Reaction: [[RXN-6550]]
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***EC-NUMBER
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** Source: [[orthology-aragem]]
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* [[Ec-12_000650]]
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* Reaction: [[RXN-7648]]
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** ESILICULOSUS_GENOME
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** Source: [[orthology-aragem]]
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***GO-TERM
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* Reaction: [[RXN-7775]]
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== Pathways ==
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** Source: [[orthology-aragem]]
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* [[PWY-6113]], superpathway of mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6113 PWY-6113]
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* Reaction: [[RXN-7922]]
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** '''7''' reactions found over '''12''' reactions in the full pathway
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** Source: [[orthology-aragem]]
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* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
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* Reaction: [[RXN-8450]]
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** '''30''' reactions found over '''182''' reactions in the full pathway
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** Source: [[orthology-aragem]]
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== Reconstruction information  ==
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* Reaction: [[RXN1F-162]]
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* [[annotation]]:
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** Source: [[orthology-aragem]]
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** [[pathwaytools]]:
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* Reaction: [[RXN1F-163]]
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*** [[esiliculosus_genome]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN1F-165]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN1F-167]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN1F-168]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN1F-93]]
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[PWY-5059]]
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* [[PWY1F-FLAVSYN]]
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* [[PWY-6787]]
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* [[PWY-5035]]
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* [[PWY-5390]]
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* [[PWY-5391]]
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* [[PWY-5070]]
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* [[PWY-5152]]
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* [[PWY-3101]]
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* [[PWY1F-823]]
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* [[PWY-102]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=3042016}}
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{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=beta-ketoacyl synthase, partial}}
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{{#set: right end position=3047279}}
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{{#set: common name=Thiolase-like, subgroup}}
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{{#set: centisome position=50.94917    }}
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{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
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{{#set: common name=Esi_0035_0121|Esi0035_0121}}
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{{#set: ec number=EC-2.3.1.41}}
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{{#set: reaction associated=NARINGENIN-3-DIOXYGENASE-RXN|RXN-113|RXN-115|RXN-171|RXN-527|RXN-602|RXN-6550|RXN-7648|RXN-7775|RXN-7922|RXN-8450|RXN1F-162|RXN1F-163|RXN1F-165|RXN1F-167|RXN1F-168|RXN1F-93}}
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{{#set: gene associated=Ec-27_002090|Ec-12_000640|Ec-27_003480|Ec-12_000650}}
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{{#set: pathway associated=PWY-5059|PWY1F-FLAVSYN|PWY-6787|PWY-5035|PWY-5390|PWY-5391|PWY-5070|PWY-5152|PWY-3101|PWY1F-823|PWY-102}}
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{{#set: in pathway=PWY-6113|PWYG-321}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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−
{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:31, 21 March 2018

Gene Ec-19_002750

  • left end position:
    • 3042016
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3047279
  • centisome position:
    • 50.94917
  • Synonym(s):
    • Esi_0035_0121
    • Esi0035_0121

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-19_002750&oldid=27497"