Difference between revisions of "RXN0-5234"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTATHIONINE-BETA-LYASE-RXN CYSTATHIONINE-BETA-LYASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5234 RXN0-5234] == * direction: ** LEFT-TO-RIGHT * common name: ** Serine hydroxymethyltransfe...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTATHIONINE-BETA-LYASE-RXN CYSTATHIONINE-BETA-LYASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5234 RXN0-5234] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
+
** Serine hydroxymethyltransferase
−
** Cystathionine beta-lyase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.4.1.8 EC-4.4.1.8]
+
** [http://enzyme.expasy.org/EC/4.1.2 EC-4.1.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[L-CYSTATHIONINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[HOMO-CYS]][c] '''+''' 1 [[AMMONIUM]][c]
+
** 1 [[ALLO-THR]][c] '''=>''' 1 [[GLY]][c] '''+''' 1 [[ACETALD]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-cystathionine[c] '''+''' 1 H2O[c] '''=>''' 1 pyruvate[c] '''+''' 1 L-homocysteine[c] '''+''' 1 ammonium[c]
+
** 1 DL-allothreonine[c] '''=>''' 1 glycine[c] '''+''' 1 acetaldehyde[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-00_002820]]
+
* Gene: [[Ec-14_004260]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Ec-05_006760]]
+
* Gene: [[Ec-24_002640]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13965 13965]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01286 R01286]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q07703 Q07703]
 
−
** [http://www.uniprot.org/uniprot/Q9K024 Q9K024]
 
−
** [http://www.uniprot.org/uniprot/Q9JV36 Q9JV36]
 
−
** [http://www.uniprot.org/uniprot/P44527 P44527]
 
−
** [http://www.uniprot.org/uniprot/P18949 P18949]
 
−
** [http://www.uniprot.org/uniprot/P53780 P53780]
 
−
** [http://www.uniprot.org/uniprot/O94350 O94350]
 
−
** [http://www.uniprot.org/uniprot/P0A4K3 P0A4K3]
 
−
** [http://www.uniprot.org/uniprot/P06721 P06721]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Cys/Met metabolism, pyridoxal phosphate-dependent enzyme}}
+
{{#set: common name=Serine hydroxymethyltransferase}}
−
{{#set: common name=Cystathionine beta-lyase}}
+
{{#set: ec number=EC-4.1.2}}
−
{{#set: ec number=EC-4.4.1.8}}
+
{{#set: gene associated=Ec-14_004260|Ec-24_002640}}
−
{{#set: gene associated=Ec-00_002820|Ec-05_006760}}
+
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 19:32, 21 March 2018

Reaction RXN0-5234

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Serine hydroxymethyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 DL-allothreonine[c] => 1 glycine[c] + 1 acetaldehyde[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN0-5234&oldid=27674"