Difference between revisions of "Ec-19 001900"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PANTEPADENYLYLTRAN-RXN PANTEPADENYLYLTRAN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [ht...")
 
(Created page with "Category:Gene == Gene Ec-19_001900 == * left end position: ** 2034854 * transcription direction: ** NEGATIVE * right end position: ** 2040940 * centisome position: ** 34.0...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PANTEPADENYLYLTRAN-RXN PANTEPADENYLYLTRAN-RXN] ==
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== Gene Ec-19_001900 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2034854
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.7.7.3 EC-2.7.7.3]
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** NEGATIVE
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* right end position:
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** 2040940
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* centisome position:
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** 34.08073   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0240_0034
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** Esi0240_0034
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.1.1.64-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[PANTETHEINE-P]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[DEPHOSPHO-COA]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 H+[c] '''+''' 1 4'-phosphopantetheine[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 3'-dephospho-CoA[c]
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* Reaction: [[CARBOXYLESTERASE-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: go-term
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== Pathways  ==
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* Reaction: [[RETINYL-PALMITATE-ESTERASE-RXN]]
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* [[COA-PWY-1]], coenzyme A biosynthesis II (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=COA-PWY-1 COA-PWY-1]
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** Source: [[annotation-esiliculosus_genome]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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*** Assignment: go-term
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* [[COA-PWY]], coenzyme A biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=COA-PWY COA-PWY]
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* Reaction: [[RXN-10711]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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** Source: [[annotation-esiliculosus_genome]]
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== Reconstruction information  ==
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*** Assignment: go-term
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* [[gap-filling]]:
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* Reaction: [[RXN-10767]]
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** [[meneco]]:
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** Source: [[annotation-esiliculosus_genome]]
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*** [[added for gapfilling]]
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*** Assignment: go-term
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* Reaction: [[RXN-12252]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN-12322]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-12575]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXNQT-4366]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-6857]]
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* [[PWY-6303]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2034854}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19801 19801]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2040940}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03035 R03035]
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{{#set: centisome position=34.08073    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0240_0034|Esi0240_0034}}
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{{#set: ec number=EC-2.7.7.3}}
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{{#set: reaction associated=3.1.1.64-RXN|CARBOXYLESTERASE-RXN|RETINYL-PALMITATE-ESTERASE-RXN|RXN-10711|RXN-10767|RXN-12252|RXN-12322|RXN-12575|RXNQT-4366}}
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{{#set: in pathway=COA-PWY-1|COA-PWY}}
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{{#set: pathway associated=PWY-6857|PWY-6303}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction source=added for gapfilling}}
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Latest revision as of 19:34, 21 March 2018

Gene Ec-19_001900

  • left end position:
    • 2034854
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2040940
  • centisome position:
    • 34.08073
  • Synonym(s):
    • Esi_0240_0034
    • Esi0240_0034

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-19_001900&oldid=27865"