Difference between revisions of "Ec-10 004010"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8036 RXN-8036] == * direction: ** LEFT-TO-RIGHT * common name: ** Beta-glucosidase, family GH1...")
 
(Created page with "Category:Gene == Gene Ec-10_004010 == * left end position: ** 4113146 * transcription direction: ** NEGATIVE * right end position: ** 4122323 * centisome position: ** 63.2...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8036 RXN-8036] ==
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== Gene Ec-10_004010 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4113146
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* common name:
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* transcription direction:
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** Beta-glucosidase, family GH1
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** NEGATIVE
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** Beta-glucosidase, family GH3
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* right end position:
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** Beta-glucosidase, family GH30
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** 4122323
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/3.2.1.21 EC-3.2.1.21]
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** 63.26958   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0032_0064
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** Esi0032_0064
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GALACTOSYLCERAMIDE-SULFOTRANSFERASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[CPD-7417]][c] '''=>''' 1 [[Glucopyranose]][c] '''+''' 1 [[CPD-7418]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 H2O[c] '''+''' 1 cis-coumarinic acid-β-D-glucoside[c] '''=>''' 1 D-glucopyranose[c] '''+''' 1 coumarinate[c]
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* Reaction: [[RXN-17203]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: go-term
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Ec-07_005240]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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* [[Ec-26_002410]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-20_004800]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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* [[Ec-04_002190]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-07_001850]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways ==
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* [[PWY-5176]], coumarin biosynthesis (via 2-coumarate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5176 PWY-5176]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[aragem]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4113146}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31223 31223]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=4122323}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04998 R04998]
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{{#set: centisome position=63.26958    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0032_0064|Esi0032_0064}}
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{{#set: common name=Beta-glucosidase, family GH1}}
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{{#set: reaction associated=GALACTOSYLCERAMIDE-SULFOTRANSFERASE-RXN|RXN-17203}}
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{{#set: common name=Beta-glucosidase, family GH3}}
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{{#set: common name=Beta-glucosidase, family GH30}}
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{{#set: ec number=EC-3.2.1.21}}
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{{#set: gene associated=Ec-07_005240|Ec-26_002410|Ec-20_004800|Ec-04_002190|Ec-07_001850}}
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{{#set: in pathway=PWY-5176}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:34, 21 March 2018

Gene Ec-10_004010

  • left end position:
    • 4113146
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4122323
  • centisome position:
    • 63.26958
  • Synonym(s):
    • Esi_0032_0064
    • Esi0032_0064

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-10_004010&oldid=27897"