Difference between revisions of "RXN-14120"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSINE--TRNA-LIGASE-RXN LYSINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14120 RXN-14120] == * direction: ** REVERSIBLE * common name: ** nucleoside diphosphate kinase...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSINE--TRNA-LIGASE-RXN LYSINE--TRNA-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14120 RXN-14120] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Lysyl-tRNA Synthetase
+
** nucleoside diphosphate kinase
−
** Lysyl-tRNA ligase
+
** Nucleoside diphosphate kinase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.1.1.6 EC-6.1.1.6]
+
** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[LYS]][c] '''+''' 1 [[LYS-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-LYS-tRNAs]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[IDP]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[ITP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 ATP[c] '''+''' 1 L-lysine[c] '''+''' 1 a tRNAlys[c] '''=>''' 1 AMP[c] '''+''' 1 an L-lysyl-[tRNAlys][c] '''+''' 1 diphosphate[c]
+
** 1 IDP[c] '''+''' 1 ATP[c] '''<=>''' 1 ADP[c] '''+''' 1 ITP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-01_005790]]
+
* Gene: [[Ec-11_005170]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: GO-TERM
−
* [[Ec-19_000900]]
+
* Gene: [[Ec-03_001380]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: GO-TERM
 +
* Gene: [[Ec-04_001140]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-22_003280]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-26_003930]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-07_000140]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-11_004330]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-aragem]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
 
−
** '''21''' reactions found over '''21''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-aragem]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30350 30350]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03658 R03658]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00722 R00722]
−
* UNIPROT:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/P41258 P41258]
+
{{#set: common name=nucleoside diphosphate kinase}}
−
** [http://www.uniprot.org/uniprot/P46861 P46861]
+
{{#set: common name=Nucleoside diphosphate kinase}}
−
** [http://www.uniprot.org/uniprot/P47382 P47382]
+
{{#set: ec number=EC-2.7.4.6}}
−
** [http://www.uniprot.org/uniprot/O57963 O57963]
+
{{#set: gene associated=Ec-11_005170|Ec-03_001380|Ec-04_001140|Ec-22_003280|Ec-26_003930|Ec-07_000140|Ec-11_004330}}
−
** [http://www.uniprot.org/uniprot/O51603 O51603]
+
{{#set: in pathway=}}
−
** [http://www.uniprot.org/uniprot/Q9JTT7 Q9JTT7]
+
{{#set: reconstruction category=orthology|annotation}}
−
** [http://www.uniprot.org/uniprot/O83650 O83650]
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
−
** [http://www.uniprot.org/uniprot/Q9X231 Q9X231]
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P43825 P43825]
+
−
** [http://www.uniprot.org/uniprot/Q9ZDF8 Q9ZDF8]
+
−
** [http://www.uniprot.org/uniprot/O84786 O84786]
+
−
** [http://www.uniprot.org/uniprot/Q9Z6X5 Q9Z6X5]
+
−
** [http://www.uniprot.org/uniprot/Q9CII7 Q9CII7]
+
−
** [http://www.uniprot.org/uniprot/P56126 P56126]
+
−
** [http://www.uniprot.org/uniprot/Q9ZMP8 Q9ZMP8]
+
−
** [http://www.uniprot.org/uniprot/O67258 O67258]
+
−
** [http://www.uniprot.org/uniprot/O84002 O84002]
+
−
** [http://www.uniprot.org/uniprot/Q9RHV9 Q9RHV9]
+
−
** [http://www.uniprot.org/uniprot/P32048 P32048]
+
−
** [http://www.uniprot.org/uniprot/P37879 P37879]
+
−
** [http://www.uniprot.org/uniprot/Q48986 Q48986]
+
−
** [http://www.uniprot.org/uniprot/P0A8N7 P0A8N7]
+
−
** [http://www.uniprot.org/uniprot/P37477 P37477]
+
−
** [http://www.uniprot.org/uniprot/P75500 P75500]
+
−
** [http://www.uniprot.org/uniprot/P95970 P95970]
+
−
** [http://www.uniprot.org/uniprot/P73443 P73443]
+
−
** [http://www.uniprot.org/uniprot/P15180 P15180]
+
−
** [http://www.uniprot.org/uniprot/P0A8N3 P0A8N3]
+
−
** [http://www.uniprot.org/uniprot/P0A8N5 P0A8N5]
+
−
** [http://www.uniprot.org/uniprot/Q43776 Q43776]
+
−
** [http://www.uniprot.org/uniprot/O74059 O74059]
+
−
** [http://www.uniprot.org/uniprot/O30522 O30522]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=Lysyl-tRNA Synthetase}}
+
−
{{#set: common name=Lysyl-tRNA ligase}}
+
−
{{#set: ec number=EC-6.1.1.6}}
+
−
{{#set: gene associated=Ec-01_005790|Ec-19_000900}}
+
−
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Latest revision as of 19:02, 21 March 2018

Reaction RXN-14120

  • direction:
    • REVERSIBLE
  • common name:
    • nucleoside diphosphate kinase
    • Nucleoside diphosphate kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 IDP[c] + 1 ATP[c] <=> 1 ADP[c] + 1 ITP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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