Difference between revisions of "CPD-17382"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9839 RXN-9839] == * direction: ** LEFT-TO-RIGHT * common name: ** Mannuronan C-5-epimerase ** M...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17382 CPD-17382] == * smiles: ** CCC=CCC=CCC=CCC=CCC=CCCCCCC(O)CC(SCCNC(=O)CCNC(=O)C(O)C(C)...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9839 RXN-9839] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17382 CPD-17382] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CCC=CCC=CCC=CCC=CCC=CCCCCCC(O)CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O
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* inchi key:
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** InChIKey=DRQAURCKCKDINZ-KPYXOPPTSA-J
 
* common name:
 
* common name:
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** Mannuronan C-5-epimerase
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** (3R)-hydroxy-tetracosapentaenoyl-CoA
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** Mannuronan C-5-epimerase 4
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* molecular weight:
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* ec number:
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** 1120.05   
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** [http://enzyme.expasy.org/EC/5.1.3.37 EC-5.1.3.37]
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* Synonym(s):
 
* Synonym(s):
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** (3R)-hydroxy-(9Z,12Z,15Z,18Z,21Z)-tetracosapentaenoyl-CoA
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** (3R)-hydroxy-all-cis-9,12,15,18,21-tetracosapentaenoyl-CoA
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** (3R)-hydroxy-(9Z,12Z,15Z,18Z,21Z)-tetracosa-9,12,15,18,21-pentaenoyl-CoA
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-16130]]
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** 1 [[Poly-beta-D-Mannuronate]][c] '''=>''' 1 [[ALGINATE]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[RXN-16129]]
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** 1 mannuronan[c] '''=>''' 1 alginate[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-08_004820]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-07_000890]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-24_002750]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-25_001850]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-19_003150]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-27_006700]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-06_006700]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-20_004700]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-11_000400]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-12_000360]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-09_003950]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-6082]], alginate biosynthesis II (bacterial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6082 PWY-6082]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6073]], alginate biosynthesis I (algal): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6073 PWY-6073]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=Mannuronan C-5-epimerase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=72551545 72551545]
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{{#set: common name=Mannuronan C-5-epimerase 4}}
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* CHEBI:
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{{#set: ec number=EC-5.1.3.37}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=76462 76462]
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{{#set: gene associated=Ec-08_004820|Ec-07_000890|Ec-24_002750|Ec-25_001850|Ec-19_003150|Ec-27_006700|Ec-06_006700|Ec-20_004700|Ec-11_000400|Ec-12_000360|Ec-09_003950}}
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{{#set: smiles=CCC=CCC=CCC=CCC=CCC=CCCCCCC(O)CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O}}
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{{#set: in pathway=PWY-6082|PWY-6073}}
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{{#set: inchi key=InChIKey=DRQAURCKCKDINZ-KPYXOPPTSA-J}}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=(3R)-hydroxy-tetracosapentaenoyl-CoA}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: molecular weight=1120.05    }}
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{{#set: reconstruction source=esiliculosus_genome}}
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{{#set: common name=(3R)-hydroxy-(9Z,12Z,15Z,18Z,21Z)-tetracosapentaenoyl-CoA|(3R)-hydroxy-all-cis-9,12,15,18,21-tetracosapentaenoyl-CoA|(3R)-hydroxy-(9Z,12Z,15Z,18Z,21Z)-tetracosa-9,12,15,18,21-pentaenoyl-CoA}}
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{{#set: consumed by=RXN-16130}}
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{{#set: produced by=RXN-16129}}

Latest revision as of 19:35, 21 March 2018

Metabolite CPD-17382

  • smiles:
    • CCC=CCC=CCC=CCC=CCC=CCCCCCC(O)CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O
  • inchi key:
    • InChIKey=DRQAURCKCKDINZ-KPYXOPPTSA-J
  • common name:
    • (3R)-hydroxy-tetracosapentaenoyl-CoA
  • molecular weight:
    • 1120.05
  • Synonym(s):
    • (3R)-hydroxy-(9Z,12Z,15Z,18Z,21Z)-tetracosapentaenoyl-CoA
    • (3R)-hydroxy-all-cis-9,12,15,18,21-tetracosapentaenoyl-CoA
    • (3R)-hydroxy-(9Z,12Z,15Z,18Z,21Z)-tetracosa-9,12,15,18,21-pentaenoyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CCC=CCC=CCC=CCC=CCC=CCCCCCC(O)CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-17382&oldid=27960"