Difference between revisions of "Ec-23 001820"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-ISOPROPYLMALATESYN-RXN 2-ISOPROPYLMALATESYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
 
(Created page with "Category:Gene == Gene Ec-23_001820 == * left end position: ** 1837714 * transcription direction: ** NEGATIVE * right end position: ** 1868855 * centisome position: ** 37.9...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-ISOPROPYLMALATESYN-RXN 2-ISOPROPYLMALATESYN-RXN] ==
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== Gene Ec-23_001820 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1837714
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* common name:
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* transcription direction:
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** 2-Isopropylmalate synthase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.3.3.13 EC-2.3.3.13]
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** 1868855
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* centisome position:
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** 37.97348   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0042_0095
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** Esi0042_0095
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** TOP2
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[5.99.1.3-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[ACETYL-COA]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[3-CARBOXY-3-HYDROXY-ISOCAPROATE]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H2O[c] '''+''' 1 3-methyl-2-oxobutanoate[c] '''+''' 1 acetyl-CoA[c] '''=>''' 1 coenzyme A[c] '''+''' 1 (2S)-2-isopropylmalate[c] '''+''' 1 H+[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-18_000460]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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* [[Ec-28_002630]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways ==
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* [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[aragem]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=1837714}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21524 21524]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=1868855}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01213 R01213]
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{{#set: centisome position=37.97348    }}
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* UNIPROT:
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{{#set: common name=Esi_0042_0095|Esi0042_0095|TOP2}}
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** [http://www.uniprot.org/uniprot/P06208 P06208]
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{{#set: reaction associated=5.99.1.3-RXN}}
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** [http://www.uniprot.org/uniprot/Q58595 Q58595]
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** [http://www.uniprot.org/uniprot/P09151 P09151]
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** [http://www.uniprot.org/uniprot/Q9PLV9 Q9PLV9]
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** [http://www.uniprot.org/uniprot/Q9JUK6 Q9JUK6]
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** [http://www.uniprot.org/uniprot/Q58787 Q58787]
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** [http://www.uniprot.org/uniprot/P94565 P94565]
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** [http://www.uniprot.org/uniprot/Q9JP75 Q9JP75]
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** [http://www.uniprot.org/uniprot/Q02141 Q02141]
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** [http://www.uniprot.org/uniprot/P48575 P48575]
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** [http://www.uniprot.org/uniprot/O86511 O86511]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=2-Isopropylmalate synthase}}
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{{#set: ec number=EC-2.3.3.13}}
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{{#set: gene associated=Ec-18_000460|Ec-28_002630}}
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{{#set: in pathway=LEUSYN-PWY|PWY-6871}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:35, 21 March 2018

Gene Ec-23_001820

  • left end position:
    • 1837714
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 1868855
  • centisome position:
    • 37.97348
  • Synonym(s):
    • Esi_0042_0095
    • Esi0042_0095
    • TOP2

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-23_001820&oldid=28005"