Difference between revisions of "PWY-6598"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9532 RXN-9532] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-dodecanoyl-[acyl-carrie...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6598 PWY-6598] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-131567 TAX-...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9532 RXN-9532] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6598 PWY-6598] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-131567 TAX-131567]
 
* common name:
 
* common name:
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** 3-oxo-dodecanoyl-[acyl-carrier protein] reductase
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** sciadonate biosynthesis
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** NAD(P)-binding domain
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
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* Synonym(s):
 
* Synonym(s):
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** 5,11,14-eicosatrienoic acid biosynthesis
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** 5,11,14-eicosatrienoate biosynthesis
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** sciadonic acid biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''5''' reactions in the full pathway
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** 1 [[3-oxo-dodecanoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[R-3-hydroxydodecanoyl-ACPs]][c]
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* [[RXN-16094]]
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* With common name(s):
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** 0 associated gene:
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** 1 a 3-oxo-dodecanoyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 a (3R)-3-hydroxydodecanoyl-[acp][c]
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** 1 reconstruction source(s) associated:
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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== Genes associated with this reaction  ==
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* [[RXN-16095]]
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Genes have been associated with this reaction based on different elements listed below.
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** 0 associated gene:
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* [[Ec-01_007100]]
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** 1 reconstruction source(s) associated:
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** ESILICULOSUS_GENOME
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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***EC-NUMBER
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* [[RXN-16096]]
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== Pathways  ==
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** 0 associated gene:
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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** 1 reconstruction source(s) associated:
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** '''28''' reactions found over '''31''' reactions in the full pathway
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
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* [[RXN-16097]]
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** '''20''' reactions found over '''31''' reactions in the full pathway
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** 0 associated gene:
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== Reconstruction information  ==
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** 1 reconstruction source(s) associated:
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* [[annotation]]:
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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** [[pathwaytools]]:
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== Reaction(s) not found ==
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*** [[esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11677 RXN-11677]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-131567}}
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{{#set: common name=3-oxo-dodecanoyl-[acyl-carrier protein] reductase}}
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{{#set: common name=sciadonate biosynthesis}}
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{{#set: common name=NAD(P)-binding domain}}
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{{#set: common name=5,11,14-eicosatrienoic acid biosynthesis|5,11,14-eicosatrienoate biosynthesis|sciadonic acid biosynthesis}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: reaction found=4}}
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{{#set: ec number=EC-2.3.1.85}}
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{{#set: total reaction=5}}
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{{#set: ec number=EC-1.1.1.100}}
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{{#set: completion rate=80.0}}
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{{#set: gene associated=Ec-01_007100}}
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{{#set: in pathway=PWY-5971|PWY-5994}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:02, 21 March 2018

Pathway PWY-6598

  • taxonomic range:
  • common name:
    • sciadonate biosynthesis
  • Synonym(s):
    • 5,11,14-eicosatrienoic acid biosynthesis
    • 5,11,14-eicosatrienoate biosynthesis
    • sciadonic acid biosynthesis

Reaction(s) found

4 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-6598&oldid=24072"