Difference between revisions of "Ec-19 000230"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14642 RXN-14642] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Gene == Gene Ec-19_000230 == * left end position: ** 300850 * transcription direction: ** POSITIVE * right end position: ** 305449 * centisome position: ** 5.0387...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14642 RXN-14642] ==
+
== Gene Ec-19_000230 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 300850
−
* ec number:
+
* transcription direction:
−
** [http://enzyme.expasy.org/EC/1.2.1 EC-1.2.1]
+
** POSITIVE
 +
* right end position:
 +
** 305449
 +
* centisome position:
 +
** 5.038783   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0359_0023
 +
** Esi0359_0023
 +
** APX
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[PEROXID-RXN]]
−
** 1 [[Acceptor]][c] '''+''' 1 [[GLYCOLALDEHYDE]][c] '''=>''' 1 [[GLYCOLLATE]][c] '''+''' 1 [[Donor-H2]][c] '''+''' 1 [[PROTON]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: go-term
−
** 1 an oxidized unknown electron acceptor[c] '''+''' 1 glycolaldehyde[c] '''=>''' 1 glycolate[c] '''+''' 1 an reduced unknown electron acceptor[c] '''+''' 1 H+[c]
+
* Reaction: [[RXN-12440]]
−
 
+
** Source: [[annotation-esiliculosus_genome]]
−
== Genes associated with this reaction  ==
+
*** Assignment: ec-number
−
== Pathways  ==
+
* Reaction: [[RXN-14240]]
−
* [[PWY-7295]], L-arabinose degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7295 PWY-7295]
+
** Source: [[annotation-esiliculosus_genome]]
−
** '''3''' reactions found over '''8''' reactions in the full pathway
+
*** Assignment: go-term
−
* [[PWY-7294]], xylose degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7294 PWY-7294]
+
* Reaction: [[RXN-15288]]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** Source: [[annotation-esiliculosus_genome]]
−
== Reconstruction information  ==
+
*** Assignment: go-term
−
* [[gap-filling]]:
+
* Reaction: [[RXN-17352]]
−
** [[meneco]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[added for gapfilling]]
+
*** Assignment: go-term
 +
* Reaction: [[RXN-3521]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-8635]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
== Pathways associated ==
 +
* [[PWY-7214]]
 +
* [[PWY-6824]]
 +
* [[PWY-6960]]
 +
* [[PWY-5461]]
 +
* [[PWY-7445]]
 +
* [[PWY-5469]]
 +
* [[PWY-5466]]
 +
* [[PWY-6959]]
 +
* [[PWY-6961]]
 +
* [[PWY-2261]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=300850}}
−
{{#set: ec number=EC-1.2.1}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: in pathway=PWY-7295|PWY-7294}}
+
{{#set: right end position=305449}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: centisome position=5.038783    }}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: common name=Esi_0359_0023|Esi0359_0023|APX}}
−
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: reaction associated=PEROXID-RXN|RXN-12440|RXN-14240|RXN-15288|RXN-17352|RXN-3521|RXN-8635}}
 +
{{#set: pathway associated=PWY-7214|PWY-6824|PWY-6960|PWY-5461|PWY-7445|PWY-5469|PWY-5466|PWY-6959|PWY-6961|PWY-2261}}

Latest revision as of 18:59, 21 March 2018

Gene Ec-19_000230

  • left end position:
    • 300850
  • transcription direction:
    • POSITIVE
  • right end position:
    • 305449
  • centisome position:
    • 5.038783
  • Synonym(s):
    • Esi_0359_0023
    • Esi0359_0023
    • APX

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-19_000230&oldid=23676"