Difference between revisions of "DETHIOBIOTIN-SYN-RXN"

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(Created page with "Category:Gene == Gene Ec-08_006390 == * left end position: ** 6205624 * transcription direction: ** POSITIVE * right end position: ** 6216159 * centisome position: ** 92.6...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DETHIOBIOTIN-SYN-RXN DETHIOBIOTIN-SYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Bifun...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-08_006390 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DETHIOBIOTIN-SYN-RXN DETHIOBIOTIN-SYN-RXN] ==
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* left end position:
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* direction:
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** 6205624
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase
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* right end position:
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* ec number:
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** 6216159
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** [http://enzyme.expasy.org/EC/6.3.3.3 EC-6.3.3.3]
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* centisome position:
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** 92.661835   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0005_0083
 
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** Esi0005_0083
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ACYL-COA-OXIDASE-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[DIAMINONONANOATE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 3 [[PROTON]][c] '''+''' 1 [[DETHIOBIOTIN]][c]
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***automated-name-match
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* With common name(s):
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* [[ACYLCOADEHYDROG-RXN]]
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** 1 7,8-diaminopelargonate[c] '''+''' 1 ATP[c] '''+''' 1 CO2[c] '''=>''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 3 H+[c] '''+''' 1 dethiobiotin[c]
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** esiliculosus_genome
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***go-term
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== Genes associated with this reaction  ==
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* [[LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** esiliculosus_genome
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* Gene: [[Ec-01_005750]]
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***go-term
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN-10696]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** esiliculosus_genome
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== Pathways ==
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***automated-name-match
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* [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1507 PWY0-1507]
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* [[RXN-10706]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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** esiliculosus_genome
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* [[PWY-7380]], biotin biosynthesis from 8-amino-7-oxononanoate II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7380 PWY-7380]
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***automated-name-match
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[RXN-10707]]
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== Reconstruction information  ==
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** esiliculosus_genome
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* Category: [[annotation]]
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***automated-name-match
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN-11026]]
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*** Tool: [[pathwaytools]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN-12518]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN-12669]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN-14264]]
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** [[pantograph]]-[[aragem]]
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* [[RXN-14576]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN-14771]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN-14775]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN-14785]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN-14789]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN-14796]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN-16134]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN-17113]]
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** esiliculosus_genome
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−
***automated-name-match
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−
== Pathways associated ==
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* [[PWY-6920]]
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* [[PWY-7340]]
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* [[PWY-7291]]
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* [[PWY-735]]
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* [[PWY-7606]]
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* [[PWY-7338]]
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* [[FAO-PWY]]
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* [[PWY66-391]]
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* [[PWY-5136]]
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* [[PWY-7726]]
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* [[PWY-7007]]
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* [[PWY-7337]]
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* [[PWY-7288]]
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* [[PWY-6837]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=6205624}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15805 15805]
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{{#set: right end position=6216159}}
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* LIGAND-RXN:
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{{#set: centisome position=92.661835    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R03182 R03182]
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{{#set: common name=Esi_0005_0083|Esi0005_0083}}
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* UNIPROT:
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{{#set: reaction associated=ACYL-COA-OXIDASE-RXN|ACYLCOADEHYDROG-RXN|LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN|RXN-10696|RXN-10706|RXN-10707|RXN-11026|RXN-12518|RXN-12669|RXN-14264|RXN-14576|RXN-14771|RXN-14775|RXN-14785|RXN-14789|RXN-14796|RXN-16134|RXN-17113}}
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** [http://www.uniprot.org/uniprot/Q9JV95 Q9JV95]
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{{#set: pathway associated=PWY-6920|PWY-7340|PWY-7291|PWY-735|PWY-7606|PWY-7338|FAO-PWY|PWY66-391|PWY-5136|PWY-7726|PWY-7007|PWY-7337|PWY-7288|PWY-6837}}
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** [http://www.uniprot.org/uniprot/Q9PIJ1 Q9PIJ1]
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** [http://www.uniprot.org/uniprot/P46397 P46397]
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** [http://www.uniprot.org/uniprot/P22818 P22818]
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** [http://www.uniprot.org/uniprot/P13000 P13000]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase}}
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{{#set: ec number=EC-6.3.3.3}}
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{{#set: gene associated=Ec-01_005750}}
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{{#set: in pathway=PWY0-1507|PWY-7380}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:38, 21 March 2018

Reaction DETHIOBIOTIN-SYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1507, biotin biosynthesis from 8-amino-7-oxononanoate I: PWY0-1507
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7380, biotin biosynthesis from 8-amino-7-oxononanoate II: PWY-7380
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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