Difference between revisions of "RXN0-5224"

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(Created page with "Category:Gene == Gene Ec-20_002080 == * left end position: ** 2075394 * transcription direction: ** POSITIVE * right end position: ** 2090859 * centisome position: ** 40.2...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5224 RXN0-5224] == * direction: ** REVERSIBLE * common name: ** Carbonic anhydrase ** carbonat...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-20_002080 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5224 RXN0-5224] ==
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* left end position:
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* direction:
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** 2075394
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** REVERSIBLE
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* transcription direction:
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* common name:
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** POSITIVE
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** Carbonic anhydrase
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* right end position:
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** carbonate dehydratase
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** 2090859
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** gamma carbonic anhydrase
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* centisome position:
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** Trimeric LpxA-like
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** 40.24873   
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.1.1 EC-4.2.1.1]
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0023_0133
 
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** Esi0023_0133
 
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** PK
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[PROTEIN-KINASE-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[HCO3]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[WATER]][c]
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***go-term
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* With common name(s):
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== Pathways associated ==
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** 1 hydrogen carbonate[c] '''+''' 1 H+[c] '''<=>''' 1 CO2[c] '''+''' 1 H2O[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-03_001960]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-10_002770]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-06_004120]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-05_001290]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-27_005680]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-07_004610]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-22_001150]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-16_004700]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways ==
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* [[PWY-241]], C4 photosynthetic carbon assimilation cycle, NADP-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-241 PWY-241]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWYQT-4429]], CO2 fixation into oxaloacetate (anaplerotic): [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4429 PWYQT-4429]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
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** '''9''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6142 PWY-6142]
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** '''10''' reactions found over '''14''' reactions in the full pathway
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* [[CYANCAT-PWY]], cyanate degradation: [http://metacyc.org/META/NEW-IMAGE?object=CYANCAT-PWY CYANCAT-PWY]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=2075394}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10748 10748]
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{{#set: right end position=2090859}}
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{{#set: direction=REVERSIBLE}}
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{{#set: centisome position=40.24873    }}
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{{#set: common name=Carbonic anhydrase}}
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{{#set: common name=Esi_0023_0133|Esi0023_0133|PK}}
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{{#set: common name=carbonate dehydratase}}
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{{#set: reaction associated=PROTEIN-KINASE-RXN}}
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{{#set: common name=gamma carbonic anhydrase}}
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{{#set: common name=Trimeric LpxA-like}}
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{{#set: ec number=EC-4.2.1.1}}
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{{#set: gene associated=Ec-03_001960|Ec-10_002770|Ec-06_004120|Ec-05_001290|Ec-27_005680|Ec-07_004610|Ec-22_001150|Ec-16_004700}}
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{{#set: in pathway=PWY-241|PWYQT-4429|PWY-7117|PWY-7115|PWY-6142|CYANCAT-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:38, 21 March 2018

Reaction RXN0-5224

  • direction:
    • REVERSIBLE
  • common name:
    • Carbonic anhydrase
    • carbonate dehydratase
    • gamma carbonic anhydrase
    • Trimeric LpxA-like
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 hydrogen carbonate[c] + 1 H+[c] <=> 1 CO2[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-241, C4 photosynthetic carbon assimilation cycle, NADP-ME type: PWY-241
    • 4 reactions found over 5 reactions in the full pathway
  • PWYQT-4429, CO2 fixation into oxaloacetate (anaplerotic): PWYQT-4429
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type: PWY-7117
    • 9 reactions found over 10 reactions in the full pathway
  • PWY-7115, C4 photosynthetic carbon assimilation cycle, NAD-ME type: PWY-7115
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6142, gluconeogenesis II (Methanobacterium thermoautotrophicum): PWY-6142
    • 10 reactions found over 14 reactions in the full pathway
  • CYANCAT-PWY, cyanate degradation: CYANCAT-PWY
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN0-5224&oldid=28358"