Difference between revisions of "RXN-5464"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SECOLOGANIN-CPD SECOLOGANIN-CPD] == * smiles: ** C=C[CH]1(C(OC=C(C(=O)OC)[CH](CC=O)1)OC2(OC(CO)...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5464 RXN-5464] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycolipid 2-alpha-mannosyltr...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SECOLOGANIN-CPD SECOLOGANIN-CPD] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5464 RXN-5464] ==
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* smiles:
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* direction:
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** C=C[CH]1(C(OC=C(C(=O)OC)[CH](CC=O)1)OC2(OC(CO)C(O)C(O)C(O)2))
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=CSKKDSFETGLMSB-NRZPKYKESA-N
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* common name:
 
* common name:
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** secologanin
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** Glycolipid 2-alpha-mannosyltransferase,family GT15
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* molecular weight:
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* ec number:
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** 388.371   
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** [http://enzyme.expasy.org/EC/2.4.1.131 EC-2.4.1.131]
 
* Synonym(s):
 
* Synonym(s):
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** (-)-secologanin
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[STRICTOSIDINE-SYNTHASE-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[CPD-5162]][c] '''+''' 2 [[GDP-MANNOSE]][c] '''=>''' 2 [[PROTON]][c] '''+''' 2 [[GDP]][c] '''+''' 1 [[CPD-5164]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 a (mannosyl)3-(N-acetylglucosaminyl)2-diphosphodolichol[c] '''+''' 2 GDP-α-D-mannose[c] '''=>''' 2 H+[c] '''+''' 2 GDP[c] '''+''' 1 a (mannosyl)5-(N-acetylglucosaminyl)2-diphosphodolichol[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-05_002900]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
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** '''19''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* LIPID_MAPS : LMPR0102070002
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29523 29523]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=161276 161276]
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{{#set: direction=LEFT-TO-RIGHT}}
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* CHEMSPIDER:
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{{#set: common name=Glycolipid 2-alpha-mannosyltransferase,family GT15}}
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** [http://www.chemspider.com/Chemical-Structure.141670.html 141670]
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{{#set: ec number=EC-2.4.1.131}}
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* CHEBI:
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{{#set: gene associated=Ec-05_002900}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=18002 18002]
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{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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* LIGAND-CPD:
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{{#set: reconstruction category=annotation}}
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** [http://www.genome.jp/dbget-bin/www_bget?C01852 C01852]
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: smiles=C=C[CH]1(C(OC=C(C(=O)OC)[CH](CC=O)1)OC2(OC(CO)C(O)C(O)C(O)2))}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: inchi key=InChIKey=CSKKDSFETGLMSB-NRZPKYKESA-N}}
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{{#set: common name=secologanin}}
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{{#set: molecular weight=388.371    }}
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{{#set: common name=(-)-secologanin}}
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{{#set: consumed by=STRICTOSIDINE-SYNTHASE-RXN}}
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Latest revision as of 19:39, 21 March 2018

Reaction RXN-5464

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glycolipid 2-alpha-mannosyltransferase,family GT15
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a (mannosyl)3-(N-acetylglucosaminyl)2-diphosphodolichol[c] + 2 GDP-α-D-mannose[c] => 2 H+[c] + 2 GDP[c] + 1 a (mannosyl)5-(N-acetylglucosaminyl)2-diphosphodolichol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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