Difference between revisions of "HOMO-CIS-ACONITATE"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.4.10-RXN 6.3.4.10-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Biotin/lipoate A/B pr...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HOMO-CIS-ACONITATE HOMO-CIS-ACONITATE] == * smiles: ** C(=O)([O-])C=C(CCC([O-])=O)C(=O)[O-] * i...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.4.10-RXN 6.3.4.10-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HOMO-CIS-ACONITATE HOMO-CIS-ACONITATE] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** C(=O)([O-])C=C(CCC([O-])=O)C(=O)[O-]
 +
* inchi key:
 +
** InChIKey=BJYPZFUWWJSAKC-ARJAWSKDSA-K
 
* common name:
 
* common name:
−
** Biotin/lipoate A/B protein ligase
+
** cis-homoaconitate
−
** Biotin/lipoate A/B protein ligase family
+
* molecular weight:
−
* ec number:
+
** 185.113   
−
** [http://enzyme.expasy.org/EC/6.3.4.10 EC-6.3.4.10]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** 3-carboxyhex-2-enedioate
 +
** (Z)-but-1-ene-1,2,4-tricarboxylate
 +
** homo-cis-aconitate
 +
** (Z)-1,2,4-but-1-enetricarboxylic acid
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[HOMOACONITATE-HYDRATASE-RXN]]
−
** 1 [[Apo-Propionyl-CoA-CO2-ligases]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[BIOTIN]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Propionyl-CoA-CO2-ligases]][c] '''+''' 1 [[AMP]][c]
+
== Reaction(s) known to produce the compound ==
−
* With common name(s):
+
* [[RXN3O-1983]]
−
** 1 apo-[propionyl-CoA:carbon-dioxide ligase (ADP-forming)][c] '''+''' 1 ATP[c] '''+''' 1 biotin[c] '''=>''' 1 diphosphate[c] '''+''' 1 [propionyl-CoA:carbon-dioxide ligase (ADP-forming)][c] '''+''' 1 AMP[c]
+
== Reaction(s) of unknown directionality ==
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-05_005190]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-01_008620]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-00_003530]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-11_004970]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
== Pathways  ==
+
−
== Reconstruction information  ==
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
* PUBCHEM:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04582 R04582]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=21158450 21158450]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* CHEMSPIDER:
−
{{#set: common name=Biotin/lipoate A/B protein ligase}}
+
** [http://www.chemspider.com/Chemical-Structure.20117984.html 20117984]
−
{{#set: common name=Biotin/lipoate A/B protein ligase family}}
+
* CHEBI:
−
{{#set: ec number=EC-6.3.4.10}}
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58174 58174]
−
{{#set: gene associated=Ec-05_005190|Ec-01_008620|Ec-00_003530|Ec-11_004970}}
+
* LIGAND-CPD:
−
{{#set: in pathway=}}
+
** [http://www.genome.jp/dbget-bin/www_bget?C04002 C04002]
−
{{#set: reconstruction category=annotation}}
+
{{#set: smiles=C(=O)([O-])C=C(CCC([O-])=O)C(=O)[O-]}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: inchi key=InChIKey=BJYPZFUWWJSAKC-ARJAWSKDSA-K}}
−
{{#set: reconstruction source=esiliculosus_genome}}
+
{{#set: common name=cis-homoaconitate}}
 +
{{#set: molecular weight=185.113    }}
 +
{{#set: common name=3-carboxyhex-2-enedioate|(Z)-but-1-ene-1,2,4-tricarboxylate|homo-cis-aconitate|(Z)-1,2,4-but-1-enetricarboxylic acid}}
 +
{{#set: consumed by=HOMOACONITATE-HYDRATASE-RXN}}
 +
{{#set: produced by=RXN3O-1983}}

Latest revision as of 19:39, 21 March 2018

Metabolite HOMO-CIS-ACONITATE

  • smiles:
    • C(=O)([O-])C=C(CCC([O-])=O)C(=O)[O-]
  • inchi key:
    • InChIKey=BJYPZFUWWJSAKC-ARJAWSKDSA-K
  • common name:
    • cis-homoaconitate
  • molecular weight:
    • 185.113
  • Synonym(s):
    • 3-carboxyhex-2-enedioate
    • (Z)-but-1-ene-1,2,4-tricarboxylate
    • homo-cis-aconitate
    • (Z)-1,2,4-but-1-enetricarboxylic acid

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C(=O)([O-])C=C(CCC([O-])=O)C(=O)[O-" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=HOMO-CIS-ACONITATE&oldid=28495"