Difference between revisions of "LUMAZINESYN-RXN"
From metabolic_network
(Created page with "Category:Gene == Gene Ec-18_002250 == * left end position: ** 2177769 * transcription direction: ** NEGATIVE * right end position: ** 2194448 * centisome position: ** 44.2...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LUMAZINESYN-RXN LUMAZINESYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 6,7-dimethyl-8-...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LUMAZINESYN-RXN LUMAZINESYN-RXN] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** 6,7-dimethyl-8-ribityllumazine synthase |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/2.5.1.78 EC-2.5.1.78] |
| − | * | + | |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| − | |||
| − | |||
| − | |||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | ** esiliculosus_genome | + | ** 1 [[DIHYDROXY-BUTANONE-P]][c] '''+''' 1 [[AMINO-RIBOSYLAMINO-1H-3H-PYR-DIONE]][c] '''=>''' 1 [[DIMETHYL-D-RIBITYL-LUMAZINE]][c] '''+''' 2 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] |
| − | *** | + | * With common name(s): |
| − | == Pathways | + | ** 1 1-deoxy-L-glycero-tetrulose 4-phosphate[c] '''+''' 1 5-amino-6-(D-ribitylamino)uracil[c] '''=>''' 1 6,7-dimethyl-8-(1-D-ribityl)lumazine[c] '''+''' 2 H2O[c] '''+''' 1 H+[c] '''+''' 1 phosphate[c] |
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Ec-27_002140]] | ||
| + | ** Source: [[annotation-esiliculosus_genome]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | == Pathways == | ||
| + | * [[PWY-6167]], flavin biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6167 PWY-6167] | ||
| + | ** '''4''' reactions found over '''10''' reactions in the full pathway | ||
| + | * [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168] | ||
| + | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY] | ||
| + | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-esiliculosus_genome]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26152 26152] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R04457 R04457] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=6,7-dimethyl-8-ribityllumazine synthase}} |
| + | {{#set: ec number=EC-2.5.1.78}} | ||
| + | {{#set: gene associated=Ec-27_002140}} | ||
| + | {{#set: in pathway=PWY-6167|PWY-6168|RIBOSYN2-PWY}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-esiliculosus_genome}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 19:40, 21 March 2018
Contents
Reaction LUMAZINESYN-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- 6,7-dimethyl-8-ribityllumazine synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 DIHYDROXY-BUTANONE-P[c] + 1 AMINO-RIBOSYLAMINO-1H-3H-PYR-DIONE[c] => 1 DIMETHYL-D-RIBITYL-LUMAZINE[c] + 2 WATER[c] + 1 PROTON[c] + 1 Pi[c]
- With common name(s):
- 1 1-deoxy-L-glycero-tetrulose 4-phosphate[c] + 1 5-amino-6-(D-ribitylamino)uracil[c] => 1 6,7-dimethyl-8-(1-D-ribityl)lumazine[c] + 2 H2O[c] + 1 H+[c] + 1 phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Ec-27_002140
- Source: annotation-esiliculosus_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-esiliculosus_genome
Pathways
- PWY-6167, flavin biosynthesis II (archaea): PWY-6167
- 4 reactions found over 10 reactions in the full pathway
- PWY-6168, flavin biosynthesis III (fungi): PWY-6168
- 6 reactions found over 9 reactions in the full pathway
- RIBOSYN2-PWY, flavin biosynthesis I (bacteria and plants): RIBOSYN2-PWY
- 8 reactions found over 9 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
External links
