Difference between revisions of "1.5.1.19-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHENYLALANINE--TRNA-LIGASE-RXN PHENYLALANINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * c...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.19-RXN 1.5.1.19-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** possible NAD/NADP oct...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHENYLALANINE--TRNA-LIGASE-RXN PHENYLALANINE--TRNA-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.19-RXN 1.5.1.19-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Phenylalanine--tRNA ligase
+
** possible NAD/NADP octopine/nopaline dehydrogenase
** tRNA-binding arm
+
** phenylalanine-tRNA ligase
+
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/6.1.1.20 EC-6.1.1.20]
+
** [http://enzyme.expasy.org/EC/1.5.1.19 EC-1.5.1.19]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[ATP]][c] '''+''' 1 [[PHE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PHE-tRNAs]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[Charged-PHE-tRNAs]][c]
+
** 1 [[ARG]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CPD-308]][c] '''+''' 1 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
** 1 ATP[c] '''+''' 1 L-phenylalanine[c] '''+''' 1 H+[c] '''+''' 1 a tRNAphe[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 an L-phenylalanyl-[tRNAphe][c]
+
** 1 L-arginine[c] '''+''' 1 H+[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 NADPH[c] '''=>''' 1 H2O[c] '''+''' 1 D-nopaline[c] '''+''' 1 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Ec-15_003330]]
+
* Gene: [[Ec-10_001890]]
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
* [[Ec-02_005310]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-27_001900]]
+
** ESILICULOSUS_GENOME
+
***EC-NUMBER
+
* [[Ec-06_008260]]
+
** ESILICULOSUS_GENOME
+
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
 
** '''21''' reactions found over '''21''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[annotation]]:
+
* Category: [[annotation]]
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19413 19413]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19637 19637]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R03660 R03660]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00563 R00563]
* UNIPROT:
+
** [http://www.uniprot.org/uniprot/P94283 P94283]
+
** [http://www.uniprot.org/uniprot/Q9ZDB4 Q9ZDB4]
+
** [http://www.uniprot.org/uniprot/Q9WZS9 Q9WZS9]
+
** [http://www.uniprot.org/uniprot/Q9PP34 Q9PP34]
+
** [http://www.uniprot.org/uniprot/P56145 P56145]
+
** [http://www.uniprot.org/uniprot/O67620 O67620]
+
** [http://www.uniprot.org/uniprot/O73984 O73984]
+
** [http://www.uniprot.org/uniprot/Q9Z6R6 Q9Z6R6]
+
** [http://www.uniprot.org/uniprot/Q58508 Q58508]
+
** [http://www.uniprot.org/uniprot/P56146 P56146]
+
** [http://www.uniprot.org/uniprot/O27545 O27545]
+
** [http://www.uniprot.org/uniprot/O26837 O26837]
+
** [http://www.uniprot.org/uniprot/O58391 O58391]
+
** [http://www.uniprot.org/uniprot/O83938 O83938]
+
** [http://www.uniprot.org/uniprot/P47436 P47436]
+
** [http://www.uniprot.org/uniprot/O67087 O67087]
+
** [http://www.uniprot.org/uniprot/O83059 O83059]
+
** [http://www.uniprot.org/uniprot/O84843 O84843]
+
** [http://www.uniprot.org/uniprot/Q9UYX3 Q9UYX3]
+
** [http://www.uniprot.org/uniprot/Q9Z7W0 Q9Z7W0]
+
** [http://www.uniprot.org/uniprot/Q9PJR8 Q9PJR8]
+
** [http://www.uniprot.org/uniprot/P47437 P47437]
+
** [http://www.uniprot.org/uniprot/Q9ZKF9 Q9ZKF9]
+
** [http://www.uniprot.org/uniprot/Q9UYX2 Q9UYX2]
+
** [http://www.uniprot.org/uniprot/Q9ZKF8 Q9ZKF8]
+
** [http://www.uniprot.org/uniprot/Q9JR76 Q9JR76]
+
** [http://www.uniprot.org/uniprot/Q57911 Q57911]
+
** [http://www.uniprot.org/uniprot/P43819 P43819]
+
** [http://www.uniprot.org/uniprot/P94282 P94282]
+
** [http://www.uniprot.org/uniprot/O84481 O84481]
+
** [http://www.uniprot.org/uniprot/Q9ZDB5 Q9ZDB5]
+
** [http://www.uniprot.org/uniprot/Q9WZS8 Q9WZS8]
+
** [http://www.uniprot.org/uniprot/Q9RRX8 Q9RRX8]
+
** [http://www.uniprot.org/uniprot/Q9PP35 Q9PP35]
+
** [http://www.uniprot.org/uniprot/P43820 P43820]
+
** [http://www.uniprot.org/uniprot/Q46107 Q46107]
+
** [http://www.uniprot.org/uniprot/P15434 P15434]
+
** [http://www.uniprot.org/uniprot/Q5SGX1 Q5SGX1]
+
** [http://www.uniprot.org/uniprot/P37984 P37984]
+
** [http://www.uniprot.org/uniprot/P51346 P51346]
+
** [http://www.uniprot.org/uniprot/P75563 P75563]
+
** [http://www.uniprot.org/uniprot/P75564 P75564]
+
** [http://www.uniprot.org/uniprot/Q55187 Q55187]
+
** [http://www.uniprot.org/uniprot/P95960 P95960]
+
** [http://www.uniprot.org/uniprot/P95961 P95961]
+
** [http://www.uniprot.org/uniprot/Q49032 Q49032]
+
** [http://www.uniprot.org/uniprot/P08312 P08312]
+
** [http://www.uniprot.org/uniprot/P07395 P07395]
+
** [http://www.uniprot.org/uniprot/O42870 O42870]
+
** [http://www.uniprot.org/uniprot/O13432 O13432]
+
** [http://www.uniprot.org/uniprot/Q9GYS8 Q9GYS8]
+
** [http://www.uniprot.org/uniprot/O42849 O42849]
+
** [http://www.uniprot.org/uniprot/P17921 P17921]
+
** [http://www.uniprot.org/uniprot/P17922 P17922]
+
** [http://www.uniprot.org/uniprot/P15625 P15625]
+
** [http://www.uniprot.org/uniprot/P08425 P08425]
+
** [http://www.uniprot.org/uniprot/P15624 P15624]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Phenylalanine--tRNA ligase}}
+
{{#set: common name=possible NAD/NADP octopine/nopaline dehydrogenase}}
{{#set: common name=tRNA-binding arm}}
+
{{#set: ec number=EC-1.5.1.19}}
{{#set: common name=phenylalanine-tRNA ligase}}
+
{{#set: gene associated=Ec-10_001890}}
{{#set: ec number=EC-6.1.1.20}}
+
{{#set: in pathway=}}
{{#set: gene associated=Ec-15_003330|Ec-02_005310|Ec-27_001900|Ec-06_008260}}
+
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 19:40, 21 March 2018

Reaction 1.5.1.19-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • possible NAD/NADP octopine/nopaline dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-arginine[c] + 1 H+[c] + 1 2-oxoglutarate[c] + 1 NADPH[c] => 1 H2O[c] + 1 D-nopaline[c] + 1 NADP+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links