Difference between revisions of "Ec-03 002790"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12002 RXN-12002] == * direction: ** LEFT-TO-RIGHT * common name: ** Adenylate kinase/UMP-CMP ki...")
 
(Created page with "Category:Gene == Gene Ec-03_002790 == * left end position: ** 3285047 * transcription direction: ** POSITIVE * right end position: ** 3292603 * centisome position: ** 50.3...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12002 RXN-12002] ==
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== Gene Ec-03_002790 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3285047
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* common name:
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* transcription direction:
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** Adenylate kinase/UMP-CMP kinase
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** POSITIVE
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** Aspartate/glutamate/uridylate kinase
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* right end position:
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** aspartate/glutamate/uridylate kinase
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** 3292603
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** cytidylate kinase
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* centisome position:
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* ec number:
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** 50.317318   
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** [http://enzyme.expasy.org/EC/2.7.4.22 EC-2.7.4.22]
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** [http://enzyme.expasy.org/EC/2.7.4.14 EC-2.7.4.14]
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* Synonym(s):
 
* Synonym(s):
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** Esi_0238_0042
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** Esi0238_0042
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** TPI
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[TRIOSEPISOMERIZATION-RXN]]
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** 1 [[UMP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[UDP]][c] '''+''' 1 [[ADP]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 UMP[c] '''+''' 1 ATP[c] '''=>''' 1 UDP[c] '''+''' 1 ADP[c]
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== Pathways associated ==
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* [[PWY-1042]]
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== Genes associated with this reaction  ==
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* [[P341-PWY]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-7003]]
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* [[Ec-07_003680]]
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* [[PWY66-373]]
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** ESILICULOSUS_GENOME
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* [[GLUCONEO-PWY]]
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***AUTOMATED-NAME-MATCH
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* [[GLYCOLYSIS]]
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* [[Ec-16_005090]]
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* [[PWY-6142]]
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** ESILICULOSUS_GENOME
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* [[CALVIN-PWY]]
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***AUTOMATED-NAME-MATCH
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* [[ANAGLYCOLYSIS-PWY]]
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* [[Ec-06_003080]]
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* [[PWY-5484]]
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** ESILICULOSUS_GENOME
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* [[P185-PWY]]
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***GO-TERM
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* [[PWY66-399]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-27_003730]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-14_004920]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-24_000610]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-7176]], UTP and CTP de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7176 PWY-7176]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[aragem]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=3285047}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24400 24400]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=3292603}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00158 R00158]
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{{#set: centisome position=50.317318    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0238_0042|Esi0238_0042|TPI}}
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{{#set: common name=Adenylate kinase/UMP-CMP kinase}}
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{{#set: reaction associated=TRIOSEPISOMERIZATION-RXN}}
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{{#set: common name=Aspartate/glutamate/uridylate kinase}}
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{{#set: pathway associated=PWY-1042|P341-PWY|PWY-7003|PWY66-373|GLUCONEO-PWY|GLYCOLYSIS|PWY-6142|CALVIN-PWY|ANAGLYCOLYSIS-PWY|PWY-5484|P185-PWY|PWY66-399}}
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{{#set: common name=aspartate/glutamate/uridylate kinase}}
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{{#set: common name=cytidylate kinase}}
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{{#set: ec number=EC-2.7.4.22}}
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{{#set: ec number=EC-2.7.4.14}}
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{{#set: gene associated=Ec-07_003680|Ec-16_005090|Ec-06_003080|Ec-27_003730|Ec-14_004920|Ec-24_000610}}
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{{#set: in pathway=PWY-7176}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:41, 21 March 2018

Gene Ec-03_002790

  • left end position:
    • 3285047
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3292603
  • centisome position:
    • 50.317318
  • Synonym(s):
    • Esi_0238_0042
    • Esi0238_0042
    • TPI

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-03_002790&oldid=28664"