Difference between revisions of "Ec-08 003510"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMINEOXID-RXN AMINEOXID-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Aliphatic-amine oxi...")
 
(Created page with "Category:Gene == Gene Ec-08_003510 == * left end position: ** 3317721 * transcription direction: ** NEGATIVE * right end position: ** 3322333 * centisome position: ** 49.5...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMINEOXID-RXN AMINEOXID-RXN] ==
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== Gene Ec-08_003510 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3317721
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* common name:
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* transcription direction:
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** Aliphatic-amine oxidase
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** NEGATIVE
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** primary amine oxidase
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* right end position:
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* ec number:
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** 3322333
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** [http://enzyme.expasy.org/EC/1.4.3.21 EC-1.4.3.21]
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* centisome position:
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** 49.539917   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0126_0075
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** Esi0126_0075
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** IDS2
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.21.3.1-RXN]]
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** 1 [[Aliphatic-Amines]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[Aldehydes]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 an aliphatic amine[c] '''+''' 1 H2O[c] '''+''' 1 oxygen[c] '''=>''' 1 ammonium[c] '''+''' 1 hydrogen peroxide[c] '''+''' 1 an aldehyde[c]
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* Reaction: [[NARINGENIN-3-DIOXYGENASE-RXN]]
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** Source: [[orthology-aragem]]
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== Genes associated with this reaction  ==
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* Reaction: [[RXN-113]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-aragem]]
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* [[Ec-15_002910]]
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* Reaction: [[RXN-115]]
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** ESILICULOSUS_GENOME
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** Source: [[orthology-aragem]]
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***GO-TERM
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* Reaction: [[RXN-171]]
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* [[Ec-15_002920]]
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** Source: [[orthology-aragem]]
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** ESILICULOSUS_GENOME
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* Reaction: [[RXN-527]]
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***GO-TERM
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** Source: [[orthology-aragem]]
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== Pathways ==
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* Reaction: [[RXN-602]]
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== Reconstruction information  ==
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** Source: [[orthology-aragem]]
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* [[annotation]]:
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* Reaction: [[RXN-6550]]
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** [[pathwaytools]]:
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** Source: [[orthology-aragem]]
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*** [[esiliculosus_genome]]
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* Reaction: [[RXN-7648]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-7775]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-7922]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-8450]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN1F-162]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN1F-163]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN1F-165]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN1F-167]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN1F-168]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN1F-93]]
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[PWY-5059]]
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* [[PWY-5629]]
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* [[PWY1F-FLAVSYN]]
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* [[PWY-6787]]
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* [[PWY-5035]]
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* [[PWY-5390]]
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* [[PWY-5391]]
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* [[PWY-5070]]
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* [[PWY-5152]]
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* [[PWY-3101]]
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* [[PWY1F-823]]
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* [[PWY-102]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=3317721}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16153 16153]
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{{#set: transcription direction=NEGATIVE}}
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* UNIPROT:
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{{#set: right end position=3322333}}
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** [http://www.uniprot.org/uniprot/Q7M2P5 Q7M2P5]
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{{#set: centisome position=49.539917    }}
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** [http://www.uniprot.org/uniprot/Q9TRK6 Q9TRK6]
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{{#set: common name=Esi_0126_0075|Esi0126_0075|IDS2}}
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** [http://www.uniprot.org/uniprot/Q07123 Q07123]
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{{#set: reaction associated=1.21.3.1-RXN|NARINGENIN-3-DIOXYGENASE-RXN|RXN-113|RXN-115|RXN-171|RXN-527|RXN-602|RXN-6550|RXN-7648|RXN-7775|RXN-7922|RXN-8450|RXN1F-162|RXN1F-163|RXN1F-165|RXN1F-167|RXN1F-168|RXN1F-93}}
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** [http://www.uniprot.org/uniprot/P19801 P19801]
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{{#set: pathway associated=PWY-5059|PWY-5629|PWY1F-FLAVSYN|PWY-6787|PWY-5035|PWY-5390|PWY-5391|PWY-5070|PWY-5152|PWY-3101|PWY1F-823|PWY-102}}
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** [http://www.uniprot.org/uniprot/Q29437 Q29437]
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** [http://www.uniprot.org/uniprot/Q59118 Q59118]
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** [http://www.uniprot.org/uniprot/Q9TRK5 Q9TRK5]
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** [http://www.uniprot.org/uniprot/Q9TRC7 Q9TRC7]
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** [http://www.uniprot.org/uniprot/Q43077 Q43077]
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** [http://www.uniprot.org/uniprot/P46883 P46883]
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** [http://www.uniprot.org/uniprot/Q16853 Q16853]
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** [http://www.uniprot.org/uniprot/Q9SXW5 Q9SXW5]
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** [http://www.uniprot.org/uniprot/P12807 P12807]
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** [http://www.uniprot.org/uniprot/P49252 P49252]
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** [http://www.uniprot.org/uniprot/P36633 P36633]
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** [http://www.uniprot.org/uniprot/Q7M504 Q7M504]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Aliphatic-amine oxidase}}
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{{#set: common name=primary amine oxidase}}
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{{#set: ec number=EC-1.4.3.21}}
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{{#set: gene associated=Ec-15_002910|Ec-15_002920}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:41, 21 March 2018

Gene Ec-08_003510

  • left end position:
    • 3317721
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3322333
  • centisome position:
    • 49.539917
  • Synonym(s):
    • Esi_0126_0075
    • Esi0126_0075
    • IDS2

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-08_003510&oldid=28667"