Difference between revisions of "PHOSPHOGLYCERATE-PHOSPHATASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PORPHOBILSYNTH-RXN PORPHOBILSYNTH-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** porphobil...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOGLYCERATE-PHOSPHATASE-RXN PHOSPHOGLYCERATE-PHOSPHATASE-RXN] == * direction: ** LEFT-TO-RIGHT...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PORPHOBILSYNTH-RXN PORPHOBILSYNTH-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOGLYCERATE-PHOSPHATASE-RXN PHOSPHOGLYCERATE-PHOSPHATASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** porphobilinogen synthase, putative chloroplast precursor
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.1.24 EC-4.2.1.24]
+
** [http://enzyme.expasy.org/EC/3.1.3.20 EC-3.1.3.20]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[5-AMINO-LEVULINATE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 2 [[WATER]][c] '''+''' 1 [[PORPHOBILINOGEN]][c]
+
** 1 [[2-PG]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[GLYCERATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 5-aminolevulinate[c] '''=>''' 1 H+[c] '''+''' 2 H2O[c] '''+''' 1 porphobilinogen[c]
+
** 1 2-phospho-D-glycerate[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 D-glycerate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Ec-00_001750]]
 
−
** ESILICULOSUS_GENOME
 
−
***EC-NUMBER
 
−
** [[pantograph]]-[[aragem]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5189]], tetrapyrrole biosynthesis II (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5189 PWY-5189]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[gap-filling]]
−
** [[pantograph]]:
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** [[aragem]]
+
*** Tool: [[meneco]]
−
* [[annotation]]:
+
**** Comment: [[added for gapfilling]]
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24064 24064]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21156 21156]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00036 R00036]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01748 R01748]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P06214 P06214]
+
−
** [http://www.uniprot.org/uniprot/P13716 P13716]
+
−
** [http://www.uniprot.org/uniprot/Q7M315 Q7M315]
+
−
** [http://www.uniprot.org/uniprot/P30124 P30124]
+
−
** [http://www.uniprot.org/uniprot/Q9JV37 Q9JV37]
+
−
** [http://www.uniprot.org/uniprot/P30950 P30950]
+
−
** [http://www.uniprot.org/uniprot/Q60178 Q60178]
+
−
** [http://www.uniprot.org/uniprot/Q9PNU5 Q9PNU5]
+
−
** [http://www.uniprot.org/uniprot/Q59295 Q59295]
+
−
** [http://www.uniprot.org/uniprot/Q02250 Q02250]
+
−
** [http://www.uniprot.org/uniprot/P10518 P10518]
+
−
** [http://www.uniprot.org/uniprot/Q43148 Q43148]
+
−
** [http://www.uniprot.org/uniprot/Q42682 Q42682]
+
−
** [http://www.uniprot.org/uniprot/Q43058 Q43058]
+
−
** [http://www.uniprot.org/uniprot/Q59643 Q59643]
+
−
** [http://www.uniprot.org/uniprot/Q9S8B1 Q9S8B1]
+
−
** [http://www.uniprot.org/uniprot/P05373 P05373]
+
−
** [http://www.uniprot.org/uniprot/P0ACB2 P0ACB2]
+
−
** [http://www.uniprot.org/uniprot/Q42836 Q42836]
+
−
** [http://www.uniprot.org/uniprot/P43210 P43210]
+
−
** [http://www.uniprot.org/uniprot/Q9ZNC9 Q9ZNC9]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=porphobilinogen synthase, putative chloroplast precursor}}
+
{{#set: ec number=EC-3.1.3.20}}
−
{{#set: ec number=EC-4.2.1.24}}
+
{{#set: in pathway=}}
−
{{#set: gene associated=Ec-00_001750}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: in pathway=PWY-5189|PWY-5188}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction source=aragem}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Latest revision as of 19:41, 21 March 2018

Reaction PHOSPHOGLYCERATE-PHOSPHATASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 2-phospho-D-glycerate[c] + 1 H2O[c] => 1 phosphate[c] + 1 D-glycerate[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links




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