Difference between revisions of "PSEUDOURIDINE-KINASE-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCINATE--COA-LIGASE-GDP-FORMING-RXN SUCCINATE--COA-LIGASE-GDP-FORMING-RXN] == * direction: ** REV...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSEUDOURIDINE-KINASE-RXN PSEUDOURIDINE-KINASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: **...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCINATE--COA-LIGASE-GDP-FORMING-RXN SUCCINATE--COA-LIGASE-GDP-FORMING-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSEUDOURIDINE-KINASE-RXN PSEUDOURIDINE-KINASE-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* common name:
+
−
** Succinate--CoA ligase (GDP-forming), alpha subunit
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.2.1.4 EC-6.2.1.4]
+
** [http://enzyme.expasy.org/EC/2.7.1.83 EC-2.7.1.83]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[SUC]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[GTP]][c] '''<=>''' 1 [[SUC-COA]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[GDP]][c]
+
** 1 [[CPD-497]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PSEUDOURIDINE-5-P]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 succinate[c] '''+''' 1 coenzyme A[c] '''+''' 1 GTP[c] '''<=>''' 1 succinyl-CoA[c] '''+''' 1 phosphate[c] '''+''' 1 GDP[c]
+
** 1 pseudouridine[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 pseudouridine 5'-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Ec-10_000030]]
 
−
** ESILICULOSUS_GENOME
 
−
***EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398]
+
* [[PWY-6019]], pseudouridine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6019 PWY-6019]
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22120 22120]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22448 22448]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00432 R00432]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03315 R03315]
−
* UNIPROT:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/Q03184 Q03184]
+
{{#set: ec number=EC-2.7.1.83}}
−
** [http://www.uniprot.org/uniprot/O08371 O08371]
+
{{#set: in pathway=PWY-6019}}
−
** [http://www.uniprot.org/uniprot/O84829 O84829]
+
−
** [http://www.uniprot.org/uniprot/Q8LAD2 Q8LAD2]
+
−
** [http://www.uniprot.org/uniprot/P53587 P53587]
+
−
** [http://www.uniprot.org/uniprot/P53312 P53312]
+
−
** [http://www.uniprot.org/uniprot/P36967 P36967]
+
−
** [http://www.uniprot.org/uniprot/P13086 P13086]
+
−
** [http://www.uniprot.org/uniprot/Q9Y436 Q9Y436]
+
−
** [http://www.uniprot.org/uniprot/P68209 P68209]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=Succinate--CoA ligase (GDP-forming), alpha subunit}}
+
−
{{#set: ec number=EC-6.2.1.4}}
+
−
{{#set: gene associated=Ec-10_000030}}
+
−
{{#set: in pathway=PWY66-398}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 19:41, 21 March 2018

Reaction PSEUDOURIDINE-KINASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 pseudouridine[c] + 1 ATP[c] => 1 ADP[c] + 1 H+[c] + 1 pseudouridine 5'-phosphate[c]

Genes associated with this reaction

Pathways

  • PWY-6019, pseudouridine degradation: PWY-6019
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PSEUDOURIDINE-KINASE-RXN&oldid=28720"