Difference between revisions of "RXN0-5298"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-308 RXN0-308] == * direction: ** LEFT-TO-RIGHT * common name: ** Aminotransferase class V doma...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5298 RXN0-5298] == * direction: ** REVERSIBLE * common name: ** D-ribose pyranase RbsD/L-fucos...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-308 RXN0-308] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5298 RXN0-5298] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Aminotransferase class V domain
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** D-ribose pyranase RbsD/L-fucose mutarotase FucU
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** Cysteine desulfurase
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* ec number:
 
* ec number:
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** [http://enzyme.expasy.org/EC/2.8.1.7 EC-2.8.1.7]
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** [http://enzyme.expasy.org/EC/5.1.3.29 EC-5.1.3.29]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Cysteine-Desulfurase-L-cysteine]][c] '''+''' 1 [[CYS]][c] '''=>''' 1 [[L-Cysteine-Desulfurase-persulfide]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c]
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** 1 [[CPD-10329]][c] '''<=>''' 1 [[CPD0-1107]][c]
 
* With common name(s):
 
* With common name(s):
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** 1 an [L-cysteine desulfurase]-L-cysteine[c] '''+''' 1 L-cysteine[c] '''=>''' 1 an [L-cysteine desulfurase] L-cysteine persulfide[c] '''+''' 1 L-alanine[c]
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** 1 &alpha;-L-fucopyranose[c] '''<=>''' 1 &beta;-L-fucopyranose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-22_000950]]
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* Gene: [[Ec-18_003960]]
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** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
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***EC-NUMBER
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[Ec-21_003740]]
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−
** ESILICULOSUS_GENOME
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−
***EC-NUMBER
+
−
* [[Ec-21_005640]]
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−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
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* [[PWY0-1021]], L-alanine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1021 PWY0-1021]
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* [[FUCCAT-PWY]], fucose degradation: [http://metacyc.org/META/NEW-IMAGE?object=FUCCAT-PWY FUCCAT-PWY]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6892]], thiazole biosynthesis I (facultative anaerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6892 PWY-6892]
+
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-6823]], molybdenum cofactor biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6823 PWY-6823]
+
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-6891]], thiazole biosynthesis II (aerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6891 PWY-6891]
+
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
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** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
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* RHEA:
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** [http://www.genome.jp/dbget-bin/www_bget?R07460 R07460]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25580 25580]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: direction=REVERSIBLE}}
−
{{#set: common name=Aminotransferase class V domain}}
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{{#set: common name=D-ribose pyranase RbsD/L-fucose mutarotase FucU}}
−
{{#set: common name=Cysteine desulfurase}}
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{{#set: ec number=EC-5.1.3.29}}
−
{{#set: ec number=EC-2.8.1.7}}
+
{{#set: gene associated=Ec-18_003960}}
−
{{#set: gene associated=Ec-22_000950|Ec-21_003740|Ec-21_005640}}
+
{{#set: in pathway=FUCCAT-PWY}}
−
{{#set: in pathway=PWY0-1021|PWY-6892|PWY-6823|PWY-6891}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 19:42, 21 March 2018

Reaction RXN0-5298

  • direction:
    • REVERSIBLE
  • common name:
    • D-ribose pyranase RbsD/L-fucose mutarotase FucU
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 α-L-fucopyranose[c] <=> 1 β-L-fucopyranose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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