Difference between revisions of "Ec-14 006440"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-URACIL-5--METHYLTRANSFERASE-RXN TRNA-URACIL-5--METHYLTRANSFERASE-RXN] == * direction: ** LEFT-...")
 
(Created page with "Category:Gene == Gene Ec-14_006440 == * left end position: ** 5929702 * transcription direction: ** POSITIVE * right end position: ** 5935902 * centisome position: ** 90.3...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-URACIL-5--METHYLTRANSFERASE-RXN TRNA-URACIL-5--METHYLTRANSFERASE-RXN] ==
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== Gene Ec-14_006440 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5929702
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* common name:
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* transcription direction:
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** S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.1.1.35 EC-2.1.1.35]
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** 5935902
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* centisome position:
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** 90.3859   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0063_0023
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** Esi0063_0023
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** SEPSECS
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-10039]]
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** 1 [[Uracil-54-in-tRNA]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[tRNA-containing-5Me-uridine54]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 a uracil54 in tRNA[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 a 5-methyluracil54 in tRNA[c] '''+''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
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== Pathways associated ==
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* [[PWY-6281]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-06_000810]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways ==
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=5929702}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00594 R00594]
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{{#set: transcription direction=POSITIVE}}
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* UNIPROT:
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{{#set: right end position=5935902}}
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** [http://www.uniprot.org/uniprot/P23003 P23003]
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{{#set: centisome position=90.3859    }}
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** [http://www.uniprot.org/uniprot/P31812 P31812]
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{{#set: common name=Esi_0063_0023|Esi0063_0023|SEPSECS}}
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** [http://www.uniprot.org/uniprot/Q9PP92 Q9PP92]
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{{#set: reaction associated=RXN-10039}}
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** [http://www.uniprot.org/uniprot/Q9JT82 Q9JT82]
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{{#set: pathway associated=PWY-6281}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase}}
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{{#set: ec number=EC-2.1.1.35}}
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{{#set: gene associated=Ec-06_000810}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:42, 21 March 2018

Gene Ec-14_006440

  • left end position:
    • 5929702
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5935902
  • centisome position:
    • 90.3859
  • Synonym(s):
    • Esi_0063_0023
    • Esi0063_0023
    • SEPSECS

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-14_006440&oldid=28875"