Difference between revisions of "RXN-1126"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-06_004220 == * left end position: ** 3514846 * transcription direction: ** POSITIVE * right end position: ** 3518351 * centisome position: ** 40.1...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1126 RXN-1126] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/6....")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Ec-06_004220 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1126 RXN-1126] ==
−
* left end position:
+
* direction:
−
** 3514846
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* ec number:
−
** POSITIVE
+
** [http://enzyme.expasy.org/EC/6.2.1.12 EC-6.2.1.12]
−
* right end position:
+
−
** 3518351
+
−
* centisome position:
+
−
** 40.134083   
+
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0062_0101
 
−
** Esi0062_0101
 
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[3.2.1.113-RXN]]
+
* With identifiers:
−
** esiliculosus_genome
+
** 1 [[CPD-676]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[CAFFEOYL-COA]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
−
***go-term
+
* With common name(s):
−
== Pathways associated ==
+
** 1 trans-caffeate[c] '''+''' 1 coenzyme A[c] '''+''' 1 ATP[c] '''=>''' 1 trans-caffeoyl-CoA[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-10_001480]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-04_001280]]
 +
** Source: [[orthology-aragem]]
 +
== Pathways ==
 +
* [[PWY-7398]], coumarins biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7398 PWY-7398]
 +
** '''3''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
 +
** '''6''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-6673]], caffeoylglucarate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6673 PWY-6673]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=3514846}}
+
* LIGAND-RXN:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01943 R01943]
−
{{#set: right end position=3518351}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: centisome position=40.134083    }}
+
{{#set: ec number=EC-6.2.1.12}}
−
{{#set: common name=Esi_0062_0101|Esi0062_0101}}
+
{{#set: gene associated=Ec-10_001480|Ec-04_001280}}
−
{{#set: reaction associated=3.2.1.113-RXN}}
+
{{#set: in pathway=PWY-7398|PWY-1121|PWY-6673}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:43, 21 March 2018

Reaction RXN-1126

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 trans-caffeate[c] + 1 coenzyme A[c] + 1 ATP[c] => 1 trans-caffeoyl-CoA[c] + 1 AMP[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7398, coumarins biosynthesis (engineered): PWY-7398
    • 3 reactions found over 13 reactions in the full pathway
  • PWY-1121, suberin monomers biosynthesis: PWY-1121
    • 6 reactions found over 19 reactions in the full pathway
  • PWY-6673, caffeoylglucarate biosynthesis: PWY-6673
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-1126&oldid=28899"