Difference between revisions of "TYROSINE--TRNA-LIGASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.179-RXN 2.3.1.179-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE--TRNA-LIGASE-RXN TYROSINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.179-RXN 2.3.1.179-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE--TRNA-LIGASE-RXN TYROSINE--TRNA-LIGASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** Tyrosyl-tRNA synthetase
 +
** Tyrosine--tRNA ligase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.179 EC-2.3.1.179]
+
** [http://enzyme.expasy.org/EC/6.1.1.1 EC-6.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Palmitoleoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[3-oxo-cis-vaccenoyl-ACPs]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[TYR]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[TYR-tRNAs]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[Charged-TYR-tRNAs]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a palmitoleoyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c] '''+''' 1 a 3-oxo-cis-vacc-11-enoyl-[acp][c]
+
** 1 H+[c] '''+''' 1 L-tyrosine[c] '''+''' 1 ATP[c] '''+''' 1 a tRNAtyr[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 an L-tyrosyl-[tRNAtyr][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-18_001870]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-01_009160]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5973]], cis-vaccenate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5973 PWY-5973]
+
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[gap-filling]]:
+
* Category: [[annotation]]
−
** [[meneco]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[added for gapfilling]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10220 10220]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02918 R02918]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P28669 P28669]
 +
** [http://www.uniprot.org/uniprot/P22326 P22326]
 +
** [http://www.uniprot.org/uniprot/P36421 P36421]
 +
** [http://www.uniprot.org/uniprot/P41256 P41256]
 +
** [http://www.uniprot.org/uniprot/O51343 O51343]
 +
** [http://www.uniprot.org/uniprot/Q9PN27 Q9PN27]
 +
** [http://www.uniprot.org/uniprot/Q9CIH5 Q9CIH5]
 +
** [http://www.uniprot.org/uniprot/Q9ZL69 Q9ZL69]
 +
** [http://www.uniprot.org/uniprot/P47693 P47693]
 +
** [http://www.uniprot.org/uniprot/Q9ZCZ4 Q9ZCZ4]
 +
** [http://www.uniprot.org/uniprot/P43836 P43836]
 +
** [http://www.uniprot.org/uniprot/O83806 O83806]
 +
** [http://www.uniprot.org/uniprot/Q57834 Q57834]
 +
** [http://www.uniprot.org/uniprot/P56417 P56417]
 +
** [http://www.uniprot.org/uniprot/O67632 O67632]
 +
** [http://www.uniprot.org/uniprot/O58739 O58739]
 +
** [http://www.uniprot.org/uniprot/Q9WYU8 Q9WYU8]
 +
** [http://www.uniprot.org/uniprot/O27795 O27795]
 +
** [http://www.uniprot.org/uniprot/O84065 O84065]
 +
** [http://www.uniprot.org/uniprot/Q9JVY6 Q9JVY6]
 +
** [http://www.uniprot.org/uniprot/P48527 P48527]
 +
** [http://www.uniprot.org/uniprot/Q49900 Q49900]
 +
** [http://www.uniprot.org/uniprot/P75122 P75122]
 +
** [http://www.uniprot.org/uniprot/P73141 P73141]
 +
** [http://www.uniprot.org/uniprot/P73144 P73144]
 +
** [http://www.uniprot.org/uniprot/P95982 P95982]
 +
** [http://www.uniprot.org/uniprot/P00952 P00952]
 +
** [http://www.uniprot.org/uniprot/P04077 P04077]
 +
** [http://www.uniprot.org/uniprot/P0AGJ9 P0AGJ9]
 +
** [http://www.uniprot.org/uniprot/P12063 P12063]
 +
** [http://www.uniprot.org/uniprot/P93363 P93363]
 +
** [http://www.uniprot.org/uniprot/O14055 O14055]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.3.1.179}}
+
{{#set: common name=Tyrosyl-tRNA synthetase}}
−
{{#set: in pathway=PWY-5973}}
+
{{#set: common name=Tyrosine--tRNA ligase}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: ec number=EC-6.1.1.1}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: gene associated=Ec-18_001870|Ec-01_009160}}
−
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: in pathway=TRNA-CHARGING-PWY}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:43, 21 March 2018

Reaction TYROSINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Tyrosyl-tRNA synthetase
    • Tyrosine--tRNA ligase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 L-tyrosine[c] + 1 ATP[c] + 1 a tRNAtyr[c] => 1 diphosphate[c] + 1 AMP[c] + 1 an L-tyrosyl-[tRNAtyr][c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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