Difference between revisions of "3-DEHYDROQUINATE-DEHYDRATASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9523 RXN-9523] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-octanoyl-[acyl-carrier...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROQUINATE-DEHYDRATASE-RXN 3-DEHYDROQUINATE-DEHYDRATASE-RXN] == * direction: ** REVERSIBLE *...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9523 RXN-9523] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROQUINATE-DEHYDRATASE-RXN 3-DEHYDROQUINATE-DEHYDRATASE-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** 3-oxo-octanoyl-[acyl-carrier protein] synthase
+
** 3-dehydroquinate dehydratase
−
** Thiolase-like, subgroup
+
−
** Beta-ketoacyl synthase, N-terminal
+
−
** beta-ketoacyl synthase, partial
+
−
** 3-oxoacyl-[acyl-carrier-protein] synthase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
+
** [http://enzyme.expasy.org/EC/4.2.1.10 EC-4.2.1.10]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Hexanoyl-ACPs]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[3-Oxo-octanoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** 1 [[DEHYDROQUINATE]][c] '''<=>''' 1 [[3-DEHYDRO-SHIKIMATE]][c] '''+''' 1 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 a hexanoyl-[acyl-carrier-protein][c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 a 3-oxo-octanoyl-[acp][c] '''+''' 1 CO2[c]
+
** 1 3-dehydroquinate[c] '''<=>''' 1 3-dehydroshikimate[c] '''+''' 1 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-27_003480]]
+
* Gene: [[Ec-07_000550]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: GO-TERM
−
* [[Ec-27_002090]]
+
* Gene: [[Ec-26_004120]]
−
** ESILICULOSUS_GENOME
+
** Source: [[orthology-aragem]]
−
***EC-NUMBER
+
* Gene: [[Ec-14_005400]]
−
** [[pantograph]]-[[aragem]]
+
** Source: [[orthology-aragem]]
−
** [[pantograph]]-[[aragem]]
+
* Gene: [[Ec-02_006010]]
−
* [[Ec-12_000650]]
+
** Source: [[orthology-aragem]]
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
** [[pantograph]]-[[aragem]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-12_000640]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
+
* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163]
−
** '''28''' reactions found over '''31''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6416]], quinate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6416 PWY-6416]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[QUINATEDEG-PWY]], quinate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=QUINATEDEG-PWY QUINATEDEG-PWY]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6707]], gallate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6707 PWY-6707]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-aragem]]
−
*** [[aragem]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=3-oxo-octanoyl-[acyl-carrier protein] synthase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21096 21096]
−
{{#set: common name=Thiolase-like, subgroup}}
+
* LIGAND-RXN:
−
{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03084 R03084]
−
{{#set: common name=beta-ketoacyl synthase, partial}}
+
* UNIPROT:
−
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
+
** [http://www.uniprot.org/uniprot/P05195 P05195]
−
{{#set: ec number=EC-2.3.1.41}}
+
** [http://www.uniprot.org/uniprot/P46380 P46380]
−
{{#set: gene associated=Ec-27_003480|Ec-27_002090|Ec-12_000650|Ec-12_000640}}
+
** [http://www.uniprot.org/uniprot/Q9CF39 Q9CF39]
−
{{#set: in pathway=PWY-5971}}
+
** [http://www.uniprot.org/uniprot/P07547 P07547]
−
{{#set: reconstruction category=orthology}}
+
** [http://www.uniprot.org/uniprot/P08566 P08566]
−
{{#set: reconstruction tool=pantograph}}
+
** [http://www.uniprot.org/uniprot/P43878 P43878]
−
{{#set: reconstruction source=aragem}}
+
** [http://www.uniprot.org/uniprot/P05194 P05194]
−
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/Q58849 Q58849]
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/P0A4Z6 P0A4Z6]
−
{{#set: reconstruction source=esiliculosus_genome}}
+
** [http://www.uniprot.org/uniprot/Q9PJ53 Q9PJ53]
 +
** [http://www.uniprot.org/uniprot/P05147 P05147]
 +
** [http://www.uniprot.org/uniprot/P24670 P24670]
 +
** [http://www.uniprot.org/uniprot/P35146 P35146]
 +
** [http://www.uniprot.org/uniprot/Q42947 Q42947]
 +
** [http://www.uniprot.org/uniprot/Q48255 Q48255]
 +
** [http://www.uniprot.org/uniprot/P73367 P73367]
 +
** [http://www.uniprot.org/uniprot/O65917 O65917]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=3-dehydroquinate dehydratase}}
 +
{{#set: ec number=EC-4.2.1.10}}
 +
{{#set: gene associated=Ec-07_000550|Ec-26_004120|Ec-14_005400|Ec-02_006010}}
 +
{{#set: in pathway=PWY-6163|PWY-6416|QUINATEDEG-PWY|PWY-6707}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:44, 21 March 2018

Reaction 3-DEHYDROQUINATE-DEHYDRATASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • 3-dehydroquinate dehydratase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6163, chorismate biosynthesis from 3-dehydroquinate: PWY-6163
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-6416, quinate degradation II: PWY-6416
    • 2 reactions found over 3 reactions in the full pathway
  • QUINATEDEG-PWY, quinate degradation I: QUINATEDEG-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6707, gallate biosynthesis: PWY-6707
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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