Difference between revisions of "RXN-527"

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(Created page with "Category:Gene == Gene Ec-08_005090 == * left end position: ** 4854244 * transcription direction: ** POSITIVE * right end position: ** 4864050 * centisome position: ** 72.4...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-527 RXN-527] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1.14...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-08_005090 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-527 RXN-527] ==
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* left end position:
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* direction:
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** 4854244
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/1.14.11.23 EC-1.14.11.23]
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* right end position:
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** 4864050
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* centisome position:
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** 72.48315   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0211_0023
 
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** Esi0211_0023
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-15556]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-474]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[SUC]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-520]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 oxygen[c] '''+''' 1 (+)-taxifolin[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 succinate[c] '''+''' 1 H2O[c] '''+''' 1 CO2[c] '''+''' 1 quercetin[c]
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* [[PWY-7511]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-08_003510]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-19_002760]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-19_002750]]
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** Source: [[orthology-aragem]]
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== Pathways ==
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* [[PWY-3101]], flavonol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3101 PWY-3101]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5390]], rutin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5390 PWY-5390]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6787]], flavonoid biosynthesis (in equisetum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6787 PWY-6787]
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** '''6''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=4854244}}
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* LIGAND-RXN:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02160 R02160]
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{{#set: right end position=4864050}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=72.48315    }}
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{{#set: ec number=EC-1.14.11.23}}
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{{#set: common name=Esi_0211_0023|Esi0211_0023}}
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{{#set: gene associated=Ec-08_003510|Ec-19_002760|Ec-19_002750}}
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{{#set: reaction associated=RXN-15556}}
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{{#set: in pathway=PWY-3101|PWY-5390|PWY-6787}}
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{{#set: pathway associated=PWY-7511}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:44, 21 March 2018

Reaction RXN-527

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-3101, flavonol biosynthesis: PWY-3101
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-5390, rutin biosynthesis: PWY-5390
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6787, flavonoid biosynthesis (in equisetum): PWY-6787
    • 6 reactions found over 10 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-527&oldid=29029"