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| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPREDUCT-RXN CDPREDUCT-RXN] == | + | == Gene Ec-21_004610 == |
| − | * direction: | + | * left end position: |
| − | ** LEFT-TO-RIGHT | + | ** 5551809 |
| − | * common name: | + | * transcription direction: |
| − | ** Ribonucleoside-diphosphate reductase small chain | + | ** POSITIVE |
| − | ** ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | + | * right end position: |
| − | ** EsV-1-128 | + | ** 5570813 |
| − | ** EsV-1-180
| + | * centisome position: |
| − | * ec number: | + | ** 75.226555 |
| − | ** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1] | + | |
| | * Synonym(s): | | * Synonym(s): |
| | + | ** Esi_0131_0042 |
| | + | ** Esi0131_0042 |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers:
| + | * Reaction: [[ATPASE-RXN]] |
| − | ** 1 [[Red-Thioredoxin]][c] '''+''' 1 [[CDP]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[DCDP]][c] '''+''' 1 [[Ox-Thioredoxin]][c]
| + | ** Source: [[annotation-esiliculosus_genome]] |
| − | * With common name(s):
| + | *** Assignment: go-term |
| − | ** 1 a reduced thioredoxin[c] '''+''' 1 CDP[c] '''=>''' 1 H2O[c] '''+''' 1 dCDP[c] '''+''' 1 an oxidized thioredoxin[c]
| + | == Pathways associated == |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Ec-11_002180]] | + | |
| − | ** [[pantograph]]-[[aragem]]
| + | |
| − | * [[Ec-17_003700]]
| + | |
| − | ** [[pantograph]]-[[aragem]]
| + | |
| − | * [[Ec-21_002920]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***GO-TERM
| + | |
| − | ** [[pantograph]]-[[aragem]]
| + | |
| − | * [[Ec-19_000440]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** [[pantograph]]-[[aragem]]
| + | |
| − | * [[Ec-06_005570]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Ec-06_005120]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** [[pantograph]]-[[aragem]]
| + | |
| − | * [[Ec-11_002170]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***GO-TERM
| + | |
| − | == Pathways ==
| + | |
| − | * [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
| + | |
| − | ** '''9''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | * [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7198 PWY-7198]
| + | |
| − | ** '''6''' reactions found over '''7''' reactions in the full pathway | + | |
| − | * [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
| + | |
| − | ** '''8''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | * [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
| + | |
| − | ** '''14''' reactions found over '''17''' reactions in the full pathway | + | |
| − | * [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210] | + | |
| − | ** '''8''' reactions found over '''8''' reactions in the full pathway
| + | |
| − | == Reconstruction information == | + | |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[aragem]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[esiliculosus_genome]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: left end position=5551809}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28038 28038]
| + | {{#set: transcription direction=POSITIVE}} |
| − | * LIGAND-RXN:
| + | {{#set: right end position=5570813}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R02024 R02024]
| + | {{#set: centisome position=75.226555 }} |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | {{#set: common name=Esi_0131_0042|Esi0131_0042}} |
| − | {{#set: common name=Ribonucleoside-diphosphate reductase small chain}} | + | {{#set: reaction associated=ATPASE-RXN}} |
| − | {{#set: common name=ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor}} | + | |
| − | {{#set: common name=EsV-1-128}} | + | |
| − | {{#set: common name=EsV-1-180}} | + | |
| − | {{#set: ec number=EC-1.17.4.1}} | + | |
| − | {{#set: gene associated=Ec-11_002180|Ec-17_003700|Ec-21_002920|Ec-19_000440|Ec-06_005570|Ec-06_005120|Ec-11_002170}}
| + | |
| − | {{#set: in pathway=PWY-7184|PWY-7198|PWY-6545|PWY0-166|PWY-7210}}
| + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=aragem}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=esiliculosus_genome}}
| + | |
