Difference between revisions of "Ec-19 005440"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROQUINATE-DEHYDRATASE-RXN 3-DEHYDROQUINATE-DEHYDRATASE-RXN] == * direction: ** REVERSIBLE *...")
 
(Created page with "Category:Gene == Gene Ec-19_005440 == * left end position: ** 5916383 * transcription direction: ** NEGATIVE * right end position: ** 5928604 * centisome position: ** 99.0...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROQUINATE-DEHYDRATASE-RXN 3-DEHYDROQUINATE-DEHYDRATASE-RXN] ==
+
== Gene Ec-19_005440 ==
−
* direction:
+
* left end position:
−
** REVERSIBLE
+
** 5916383
−
* common name:
+
* transcription direction:
−
** 3-dehydroquinate dehydratase
+
** NEGATIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/4.2.1.10 EC-4.2.1.10]
+
** 5928604
 +
* centisome position:
 +
** 99.09048   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0154_0009
 +
** Esi0154_0009
 +
** ASPRS
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[ASPARTATE--TRNA-LIGASE-RXN]]
−
** 1 [[DEHYDROQUINATE]][c] '''<=>''' 1 [[3-DEHYDRO-SHIKIMATE]][c] '''+''' 1 [[WATER]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 3-dehydroquinate[c] '''<=>''' 1 3-dehydroshikimate[c] '''+''' 1 H2O[c]
+
== Pathways associated ==
−
 
+
* [[TRNA-CHARGING-PWY]]
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-14_005400]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-26_004120]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-02_006010]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-07_000550]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
== Pathways ==
+
−
* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163]
+
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
−
* [[QUINATEDEG-PWY]], quinate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=QUINATEDEG-PWY QUINATEDEG-PWY]
+
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-6416]], quinate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6416 PWY-6416]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-6707]], gallate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6707 PWY-6707]
+
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[aragem]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=5916383}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21096 21096]
+
{{#set: transcription direction=NEGATIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=5928604}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03084 R03084]
+
{{#set: centisome position=99.09048    }}
−
* UNIPROT:
+
{{#set: common name=Esi_0154_0009|Esi0154_0009|ASPRS}}
−
** [http://www.uniprot.org/uniprot/P05195 P05195]
+
{{#set: reaction associated=ASPARTATE--TRNA-LIGASE-RXN}}
−
** [http://www.uniprot.org/uniprot/P46380 P46380]
+
{{#set: pathway associated=TRNA-CHARGING-PWY}}
−
** [http://www.uniprot.org/uniprot/Q9CF39 Q9CF39]
+
−
** [http://www.uniprot.org/uniprot/P07547 P07547]
+
−
** [http://www.uniprot.org/uniprot/P08566 P08566]
+
−
** [http://www.uniprot.org/uniprot/P43878 P43878]
+
−
** [http://www.uniprot.org/uniprot/P05194 P05194]
+
−
** [http://www.uniprot.org/uniprot/Q58849 Q58849]
+
−
** [http://www.uniprot.org/uniprot/P0A4Z6 P0A4Z6]
+
−
** [http://www.uniprot.org/uniprot/Q9PJ53 Q9PJ53]
+
−
** [http://www.uniprot.org/uniprot/P05147 P05147]
+
−
** [http://www.uniprot.org/uniprot/P24670 P24670]
+
−
** [http://www.uniprot.org/uniprot/P35146 P35146]
+
−
** [http://www.uniprot.org/uniprot/Q42947 Q42947]
+
−
** [http://www.uniprot.org/uniprot/Q48255 Q48255]
+
−
** [http://www.uniprot.org/uniprot/P73367 P73367]
+
−
** [http://www.uniprot.org/uniprot/O65917 O65917]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=3-dehydroquinate dehydratase}}
+
−
{{#set: ec number=EC-4.2.1.10}}
+
−
{{#set: gene associated=Ec-14_005400|Ec-26_004120|Ec-02_006010|Ec-07_000550}}
+
−
{{#set: in pathway=PWY-6163|QUINATEDEG-PWY|PWY-6416|PWY-6707}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aragem}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Latest revision as of 19:44, 21 March 2018

Gene Ec-19_005440

  • left end position:
    • 5916383
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 5928604
  • centisome position:
    • 99.09048
  • Synonym(s):
    • Esi_0154_0009
    • Esi0154_0009
    • ASPRS

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-19_005440&oldid=29061"