Difference between revisions of "RXN-2006"

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(Created page with "Category:Gene == Gene Ec-19_005440 == * left end position: ** 5916383 * transcription direction: ** NEGATIVE * right end position: ** 5928604 * centisome position: ** 99.0...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2006 RXN-2006] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With id...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-19_005440 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2006 RXN-2006] ==
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* left end position:
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* direction:
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** 5916383
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** LEFT-TO-RIGHT
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* transcription direction:
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** NEGATIVE
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* right end position:
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** 5928604
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* centisome position:
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** 99.09048   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0154_0009
 
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** Esi0154_0009
 
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** ASPRS
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ASPARTATE--TRNA-LIGASE-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[CPD-514]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[BENZOYLCOA]][c] '''+''' 1 [[ACETYL-COA]][c]
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***ec-number
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* With common name(s):
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== Pathways associated ==
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** 1 3-oxo-3-phenylpropanoyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 benzoyl-CoA[c] '''+''' 1 acetyl-CoA[c]
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* [[TRNA-CHARGING-PWY]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-26_003940]]
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** Source: [[orthology-aragem]]
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== Pathways ==
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* [[P281-PWY]], 3-phenylpropanoate degradation: [http://metacyc.org/META/NEW-IMAGE?object=P281-PWY P281-PWY]
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** '''1''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-481]], ethylbenzene degradation (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-481 PWY-481]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6443]], benzoate biosynthesis I (CoA-dependent, β-oxidative): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6443 PWY-6443]
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** '''2''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6458]], benzoyl-CoA biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6458 PWY-6458]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=5916383}}
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* LIGAND-RXN:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05506 R05506]
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{{#set: right end position=5928604}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=99.09048    }}
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{{#set: gene associated=Ec-26_003940}}
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{{#set: common name=Esi_0154_0009|Esi0154_0009|ASPRS}}
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{{#set: in pathway=P281-PWY|PWY-481|PWY-6443|PWY-6458}}
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{{#set: reaction associated=ASPARTATE--TRNA-LIGASE-RXN}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:44, 21 March 2018

Reaction RXN-2006

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-oxo-3-phenylpropanoyl-CoA[c] + 1 coenzyme A[c] => 1 benzoyl-CoA[c] + 1 acetyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • P281-PWY, 3-phenylpropanoate degradation: P281-PWY
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-481, ethylbenzene degradation (anaerobic): PWY-481
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-6443, benzoate biosynthesis I (CoA-dependent, β-oxidative): PWY-6443
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-6458, benzoyl-CoA biosynthesis: PWY-6458
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-2006&oldid=29077"