Difference between revisions of "RXN0-5398"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-713 CPD-713] == * smiles: ** CC(C)C(C)CCC(C)[CH]3(CC[CH]4([CH]2(CC(=O)[CH]1(CC(O)CCC(C)1[CH...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5398 RXN0-5398] == * direction: ** REVERSIBLE * common name: ** Pseudouridine-5'-phosphate gly...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-713 CPD-713] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5398 RXN0-5398] ==
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* smiles:
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* direction:
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** CC(C)C(C)CCC(C)[CH]3(CC[CH]4([CH]2(CC(=O)[CH]1(CC(O)CCC(C)1[CH]2CCC(C)34))))
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** REVERSIBLE
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* inchi key:
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** InChIKey=NBJZGNFIZZWBOJ-JSHJXQBASA-N
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* common name:
 
* common name:
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** 6-oxocampestanol
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** Pseudouridine-5'-phosphate glycosidase
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* molecular weight:
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* ec number:
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** 416.686   
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** [http://enzyme.expasy.org/EC/4.2.1.70 EC-4.2.1.70]
 
* Synonym(s):
 
* Synonym(s):
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** oxocampestanol
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-715]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[URACIL]][c] '''+''' 1 [[CPD-15317]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[PSEUDOURIDINE-5-P]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 uracil[c] '''+''' 1 D-ribofuranose 5-phosphate[c] '''<=>''' 1 H2O[c] '''+''' 1 pseudouridine 5'-phosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-04_005090]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-6019]], pseudouridine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6019 PWY-6019]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25200917 25200917]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18337 18337]
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* LIGAND-CPD:
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?C15789 C15789]
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** [http://www.genome.jp/dbget-bin/www_bget?R01055 R01055]
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{{#set: smiles=CC(C)C(C)CCC(C)[CH]3(CC[CH]4([CH]2(CC(=O)[CH]1(CC(O)CCC(C)1[CH]2CCC(C)34))))}}
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* UNIPROT:
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{{#set: inchi key=InChIKey=NBJZGNFIZZWBOJ-JSHJXQBASA-N}}
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** [http://www.uniprot.org/uniprot/Q9JWF1 Q9JWF1]
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{{#set: common name=6-oxocampestanol}}
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** [http://www.uniprot.org/uniprot/Q9JTX5 Q9JTX5]
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{{#set: molecular weight=416.686    }}
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** [http://www.uniprot.org/uniprot/Q9PPJ9 Q9PPJ9]
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{{#set: common name=oxocampestanol}}
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** [http://www.uniprot.org/uniprot/Q9CGH0 Q9CGH0]
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{{#set: consumed by=RXN-715}}
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** [http://www.uniprot.org/uniprot/Q9CI80 Q9CI80]
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** [http://www.uniprot.org/uniprot/Q9JX44 Q9JX44]
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** [http://www.uniprot.org/uniprot/Q9V1A5 Q9V1A5]
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** [http://www.uniprot.org/uniprot/Q9PP96 Q9PP96]
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** [http://www.uniprot.org/uniprot/Q9PN18 Q9PN18]
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** [http://www.uniprot.org/uniprot/Q9PJ89 Q9PJ89]
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** [http://www.uniprot.org/uniprot/Q9PNJ2 Q9PNJ2]
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** [http://www.uniprot.org/uniprot/Q9PLW9 Q9PLW9]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Pseudouridine-5'-phosphate glycosidase}}
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{{#set: ec number=EC-4.2.1.70}}
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{{#set: gene associated=Ec-04_005090}}
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{{#set: in pathway=PWY-6019}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:44, 21 March 2018

Reaction RXN0-5398

  • direction:
    • REVERSIBLE
  • common name:
    • Pseudouridine-5'-phosphate glycosidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 uracil[c] + 1 D-ribofuranose 5-phosphate[c] <=> 1 H2O[c] + 1 pseudouridine 5'-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6019, pseudouridine degradation: PWY-6019
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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