Difference between revisions of "Ec-27 004950"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17113 RXN-17113] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-CoA oxidase, partial *...")
 
(Created page with "Category:Gene == Gene Ec-27_004950 == * left end position: ** 4452569 * transcription direction: ** NEGATIVE * right end position: ** 4464320 * centisome position: ** 69.0...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17113 RXN-17113] ==
+
== Gene Ec-27_004950 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 4452569
−
* common name:
+
* transcription direction:
−
** acyl-CoA oxidase, partial
+
** NEGATIVE
−
** acyl-CoA oxidase
+
* right end position:
−
** Acyl-CoA oxidase/dehydrogenase, central domain
+
** 4464320
−
* ec number:
+
* centisome position:
−
** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
+
** 69.03307   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0000_0287
 +
** Esi0000_0287
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[PEROXID-RXN]]
−
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-18491]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD-18492]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: go-term
−
** 1 oxygen[c] '''+''' 1 (6Z,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 (2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA[c]
+
* Reaction: [[RXN-14240]]
−
 
+
** Source: [[annotation-esiliculosus_genome]]
−
== Genes associated with this reaction  ==
+
*** Assignment: go-term
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[RXN-15288]]
−
* [[Ec-22_002920]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** ESILICULOSUS_GENOME
+
*** Assignment: go-term
−
***EC-NUMBER
+
* Reaction: [[RXN-17352]]
−
* [[Ec-08_006390]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** ESILICULOSUS_GENOME
+
*** Assignment: go-term
−
***AUTOMATED-NAME-MATCH
+
* Reaction: [[RXN-8635]]
−
* [[Ec-26_004320]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** ESILICULOSUS_GENOME
+
*** Assignment: go-term
−
***EC-NUMBER
+
== Pathways associated ==
−
== Pathways ==
+
* [[PWY-7214]]
−
* [[PWY-7726]], (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726]
+
* [[PWY-6824]]
−
** '''13''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY-7445]]
−
== Reconstruction information  ==
+
* [[PWY-5469]]
−
* [[annotation]]:
+
* [[PWY-5466]]
−
** [[pathwaytools]]:
+
* [[PWY-5461]]
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=4452569}}
−
{{#set: common name=acyl-CoA oxidase, partial}}
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: common name=acyl-CoA oxidase}}
+
{{#set: right end position=4464320}}
−
{{#set: common name=Acyl-CoA oxidase/dehydrogenase, central domain}}
+
{{#set: centisome position=69.03307    }}
−
{{#set: ec number=EC-1.3.3.6}}
+
{{#set: common name=Esi_0000_0287|Esi0000_0287}}
−
{{#set: gene associated=Ec-22_002920|Ec-08_006390|Ec-26_004320}}
+
{{#set: reaction associated=PEROXID-RXN|RXN-14240|RXN-15288|RXN-17352|RXN-8635}}
−
{{#set: in pathway=PWY-7726}}
+
{{#set: pathway associated=PWY-7214|PWY-6824|PWY-7445|PWY-5469|PWY-5466|PWY-5461}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Latest revision as of 19:45, 21 March 2018

Gene Ec-27_004950

  • left end position:
    • 4452569
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4464320
  • centisome position:
    • 69.03307
  • Synonym(s):
    • Esi_0000_0287
    • Esi0000_0287

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-27_004950&oldid=29122"