Difference between revisions of "Ec-27 004950"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17113 RXN-17113] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-CoA oxidase, partial *...")
 
(Created page with "Category:Gene == Gene Ec-27_004950 == * left end position: ** 4452569 * transcription direction: ** NEGATIVE * right end position: ** 4464320 * centisome position: ** 69.0...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17113 RXN-17113] ==
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== Gene Ec-27_004950 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4452569
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* common name:
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* transcription direction:
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** acyl-CoA oxidase, partial
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** NEGATIVE
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** acyl-CoA oxidase
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* right end position:
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** Acyl-CoA oxidase/dehydrogenase, central domain
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** 4464320
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
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** 69.03307   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0000_0287
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** Esi0000_0287
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PEROXID-RXN]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-18491]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD-18492]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 oxygen[c] '''+''' 1 (6Z,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 (2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA[c]
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* Reaction: [[RXN-14240]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: go-term
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-15288]]
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* [[Ec-22_002920]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: go-term
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***EC-NUMBER
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* Reaction: [[RXN-17352]]
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* [[Ec-08_006390]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: go-term
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-8635]]
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* [[Ec-26_004320]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: go-term
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***EC-NUMBER
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== Pathways associated ==
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== Pathways ==
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* [[PWY-7214]]
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* [[PWY-7726]], (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726]
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* [[PWY-6824]]
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** '''13''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-7445]]
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== Reconstruction information  ==
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* [[PWY-5469]]
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* [[annotation]]:
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* [[PWY-5466]]
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** [[pathwaytools]]:
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* [[PWY-5461]]
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=4452569}}
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{{#set: common name=acyl-CoA oxidase, partial}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=acyl-CoA oxidase}}
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{{#set: right end position=4464320}}
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{{#set: common name=Acyl-CoA oxidase/dehydrogenase, central domain}}
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{{#set: centisome position=69.03307    }}
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{{#set: ec number=EC-1.3.3.6}}
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{{#set: common name=Esi_0000_0287|Esi0000_0287}}
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{{#set: gene associated=Ec-22_002920|Ec-08_006390|Ec-26_004320}}
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{{#set: reaction associated=PEROXID-RXN|RXN-14240|RXN-15288|RXN-17352|RXN-8635}}
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{{#set: in pathway=PWY-7726}}
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{{#set: pathway associated=PWY-7214|PWY-6824|PWY-7445|PWY-5469|PWY-5466|PWY-5461}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 20:45, 21 March 2018

Gene Ec-27_004950

  • left end position:
    • 4452569
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4464320
  • centisome position:
    • 69.03307
  • Synonym(s):
    • Esi_0000_0287
    • Esi0000_0287

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-27_004950&oldid=29122"