Difference between revisions of "PHOSPHASERSYN-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-11592 CPD-11592] == * smiles: ** CC(C)=CCNC2(C1(N=CN(C=1N=C(SC)N=2)C3(OC(COP(O[a tRNA])(=O)...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHASERSYN-RXN PHOSPHASERSYN-RXN] == * direction: ** REVERSIBLE * common name: ** Phosphatidyl s...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-11592 CPD-11592] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHASERSYN-RXN PHOSPHASERSYN-RXN] ==
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* smiles:
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* direction:
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** CC(C)=CCNC2(C1(N=CN(C=1N=C(SC)N=2)C3(OC(COP(O[a tRNA])(=O)[O-])C(OP([O-])(=O)O[a tRNA])C(O)3)))
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** REVERSIBLE
 
* common name:
 
* common name:
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** 2-methylthio-N6-dimethylallyladenosine37 in tRNA
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** Phosphatidyl serine synthase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.8.8 EC-2.7.8.8]
 
* Synonym(s):
 
* Synonym(s):
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** tRNA-(2-methylthio-N6-dimethylallyladenosine37)
 
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** a tRNA containing 2-methylthio-N6-dimethylallyladenosine37
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-14481]]
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** 1 [[SER]][c] '''+''' 1 [[CDPDIACYLGLYCEROL]][c] '''<=>''' 1 [[CMP]][c] '''+''' 1 [[L-1-PHOSPHATIDYL-SERINE]][c] '''+''' 1 [[PROTON]][c]
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* [[RXN0-5063]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 L-serine[c] '''+''' 1 a CDP-diacylglycerol[c] '''<=>''' 1 CMP[c] '''+''' 1 an L-1-phosphatidylserine[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-01_005920]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PHOSLIPSYN2-PWY]], superpathway of phospholipid biosynthesis II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PHOSLIPSYN2-PWY PHOSLIPSYN2-PWY]
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** '''12''' reactions found over '''23''' reactions in the full pathway
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* [[PWY-5669]], phosphatidylethanolamine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5669 PWY-5669]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CHEBI:
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* RHEA:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=74417 74417]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16913 16913]
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{{#set: smiles=CC(C)=CCNC2(C1(N=CN(C=1N=C(SC)N=2)C3(OC(COP(O[a tRNA])(=O)[O-])C(OP([O-])(=O)O[a tRNA])C(O)3)))}}
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* LIGAND-RXN:
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{{#set: common name=2-methylthio-N6-dimethylallyladenosine37 in tRNA}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01800 R01800]
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{{#set: common name=tRNA-(2-methylthio-N6-dimethylallyladenosine37)|a tRNA containing 2-methylthio-N6-dimethylallyladenosine37}}
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* UNIPROT:
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{{#set: produced by=RXN-14481|RXN0-5063}}
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** [http://www.uniprot.org/uniprot/P39823 P39823]
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** [http://www.uniprot.org/uniprot/O27106 O27106]
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** [http://www.uniprot.org/uniprot/P96282 P96282]
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** [http://www.uniprot.org/uniprot/Q9ZM68 Q9ZM68]
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** [http://www.uniprot.org/uniprot/Q58609 Q58609]
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** [http://www.uniprot.org/uniprot/O28235 O28235]
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** [http://www.uniprot.org/uniprot/O84833 O84833]
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** [http://www.uniprot.org/uniprot/Q9Z6S6 Q9Z6S6]
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** [http://www.uniprot.org/uniprot/Q9JR61 Q9JR61]
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** [http://www.uniprot.org/uniprot/Q9PNI0 Q9PNI0]
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** [http://www.uniprot.org/uniprot/Q9ZDT3 Q9ZDT3]
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** [http://www.uniprot.org/uniprot/Q48269 Q48269]
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** [http://www.uniprot.org/uniprot/Q8X9F5 Q8X9F5]
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** [http://www.uniprot.org/uniprot/P08456 P08456]
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** [http://www.uniprot.org/uniprot/P25578 P25578]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Phosphatidyl serine synthase}}
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{{#set: ec number=EC-2.7.8.8}}
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{{#set: gene associated=Ec-01_005920}}
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{{#set: in pathway=PHOSLIPSYN2-PWY|PWY-5669}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:46, 21 March 2018

Reaction PHOSPHASERSYN-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Phosphatidyl serine synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PHOSLIPSYN2-PWY, superpathway of phospholipid biosynthesis II (plants): PHOSLIPSYN2-PWY
    • 12 reactions found over 23 reactions in the full pathway
  • PWY-5669, phosphatidylethanolamine biosynthesis I: PWY-5669
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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