Difference between revisions of "Ec-27 004630"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-281 RXN66-281] == * direction: ** LEFT-TO-RIGHT * common name: ** squalene synthase ** Isopen...")
 
(Created page with "Category:Gene == Gene Ec-27_004630 == * left end position: ** 4089266 * transcription direction: ** NEGATIVE * right end position: ** 4093212 * centisome position: ** 63.4...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-281 RXN66-281] ==
+
== Gene Ec-27_004630 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 4089266
−
* common name:
+
* transcription direction:
−
** squalene synthase
+
** NEGATIVE
−
** Isopentenyl-diphosphate delta-isomerase type 1 fused to squalene synthase; probably two separate ORFs
+
* right end position:
 +
** 4093212
 +
* centisome position:
 +
** 63.400387   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0000_0340
 +
** Esi0000_0340
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[DIHYDROFOLATEREDUCT-RXN]]
−
** 1 [[CPD-465]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''=>''' 1 [[SQUALENE]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[PPI]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: go-term
−
** 1 presqualene diphosphate[c] '''+''' 1 H+[c] '''+''' 1 NAD(P)H[c] '''=>''' 1 squalene[c] '''+''' 1 NAD(P)+[c] '''+''' 1 diphosphate[c]
+
* Reaction: [[THYMIDYLATESYN-RXN]]
−
 
+
** Source: [[annotation-esiliculosus_genome]]
−
== Genes associated with this reaction  ==
+
*** Assignment: go-term
−
Genes have been associated with this reaction based on different elements listed below.
+
== Pathways associated ==
−
* [[Ec-11_001030]]
+
* [[PWY-7210]]
−
** ESILICULOSUS_GENOME
+
* [[PWY-7198]]
−
***EC-NUMBER
+
* [[PWY-7199]]
−
== Pathways  ==
+
* [[PWY-3841]]
−
== Reconstruction information  ==
+
* [[1CMET2-PWY]]
−
* [[annotation]]:
+
* [[PWY-7187]]
−
** [[pathwaytools]]:
+
* [[PWY0-166]]
−
*** [[esiliculosus_genome]]
+
* [[PWY-7184]]
 +
* [[PWY-6614]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: left end position=4089266}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02872 R02872]
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=4093212}}
−
{{#set: common name=squalene synthase}}
+
{{#set: centisome position=63.400387    }}
−
{{#set: common name=Isopentenyl-diphosphate delta-isomerase type 1 fused to squalene synthase; probably two separate ORFs}}
+
{{#set: common name=Esi_0000_0340|Esi0000_0340}}
−
{{#set: gene associated=Ec-11_001030}}
+
{{#set: reaction associated=DIHYDROFOLATEREDUCT-RXN|THYMIDYLATESYN-RXN}}
−
{{#set: in pathway=}}
+
{{#set: pathway associated=PWY-7210|PWY-7198|PWY-7199|PWY-3841|1CMET2-PWY|PWY-7187|PWY0-166|PWY-7184|PWY-6614}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Latest revision as of 19:47, 21 March 2018

Gene Ec-27_004630

  • left end position:
    • 4089266
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4093212
  • centisome position:
    • 63.400387
  • Synonym(s):
    • Esi_0000_0340
    • Esi0000_0340

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-27_004630&oldid=29293"