Difference between revisions of "RXN-9896"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-1083 CPD-1083] == * smiles: ** CC=C(C)C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9896 RXN-9896] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With id...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-1083 CPD-1083] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9896 RXN-9896] ==
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* smiles:
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* direction:
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** CC=C(C)C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=PMWATMXOQQZNBX-DKBZLLMOSA-J
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* common name:
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** (E)-2-methylcrotonoyl-CoA
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* molecular weight:
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** 845.604   
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* Synonym(s):
 
* Synonym(s):
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** methylcrotonyl-CoA
 
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** trans-2-methylbut-2-enoyl-CoA
 
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** 2-methylbut-2-enoyl-CoA
 
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** tigloyl-CoA
 
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** tiglyl-CoA
 
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** 2-methyl-crotonyl-CoA
 
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** (E)-2-methylbut-2-enoyl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 1 [[3-HYDROXY-N6N6N6-TRIMETHYL-L-LYSINE]][c] '''=>''' 1 [[GLY]][c] '''+''' 1 [[4-TRIMETHYLAMMONIOBUTANAL]][c]
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* [[TIGLYLCOA-HYDROXY-RXN]]
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* With common name(s):
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* [[RXN-14266]]
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** 1 3-hydroxy-N6,N6,N6-trimethyl-L-lysine[c] '''=>''' 1 glycine[c] '''+''' 1 4-trimethylammoniobutanal[c]
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* [[2-METHYLACYL-COA-DEHYDROGENASE-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-11_002460]]
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[PWY-6100]], L-carnitine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6100 PWY-6100]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* CAS : 6247-62-7
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R03284 R03284]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=45266534 45266534]
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{{#set: direction=LEFT-TO-RIGHT}}
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* CHEBI:
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{{#set: gene associated=Ec-11_002460}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15478 15478]
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{{#set: in pathway=PWY-6100}}
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* LIGAND-CPD:
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{{#set: reconstruction category=orthology}}
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** [http://www.genome.jp/dbget-bin/www_bget?C03345 C03345]
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{{#set: reconstruction source=orthology-aragem}}
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* HMDB : HMDB02054
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{{#set: reconstruction tool=pantograph}}
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{{#set: smiles=CC=C(C)C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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{{#set: inchi key=InChIKey=PMWATMXOQQZNBX-DKBZLLMOSA-J}}
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{{#set: common name=(E)-2-methylcrotonoyl-CoA}}
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{{#set: molecular weight=845.604    }}
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{{#set: common name=methylcrotonyl-CoA|trans-2-methylbut-2-enoyl-CoA|2-methylbut-2-enoyl-CoA|tigloyl-CoA|tiglyl-CoA|2-methyl-crotonyl-CoA|(E)-2-methylbut-2-enoyl-CoA}}
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{{#set: consumed or produced by=TIGLYLCOA-HYDROXY-RXN|RXN-14266|2-METHYLACYL-COA-DEHYDROGENASE-RXN}}
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Latest revision as of 19:47, 21 March 2018

Reaction RXN-9896

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6100, L-carnitine biosynthesis: PWY-6100
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-9896&oldid=29362"