Difference between revisions of "FORMATE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDP-MANNOSE-6-DEHYDROGENASE-RXN GDP-MANNOSE-6-DEHYDROGENASE-RXN] == * direction: ** LEFT-TO-RIGHT *...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FORMATE FORMATE] == * smiles: ** [CH]([O-])=O * inchi key: ** InChIKey=BDAGIHXWWSANSR-UHFFFAOYS...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDP-MANNOSE-6-DEHYDROGENASE-RXN GDP-MANNOSE-6-DEHYDROGENASE-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FORMATE FORMATE] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** [CH]([O-])=O
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* inchi key:
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** InChIKey=BDAGIHXWWSANSR-UHFFFAOYSA-M
 
* common name:
 
* common name:
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** NAD(P)-binding domain
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** formate
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/1.1.1.132 EC-1.1.1.132]
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** 45.018   
 
* Synonym(s):
 
* Synonym(s):
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** formic acid
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[FORMATETHFLIG-RXN]]
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** 2 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[GDP-MANNOSE]][c] '''=>''' 3 [[PROTON]][c] '''+''' 2 [[NADH]][c] '''+''' 1 [[CPD-1828]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[3.5.1.88-RXN]]
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** 2 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 GDP-α-D-mannose[c] '''=>''' 3 H+[c] '''+''' 2 NADH[c] '''+''' 1 GDP-α-D-mannuronate[c]
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* [[RXN3O-130]]
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* [[GTP-CYCLOHYDRO-I-RXN]]
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== Genes associated with this reaction  ==
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* [[RXN-13961]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-11881]]
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* [[Ec-19_004880]]
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* [[RXN66-13]]
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** ESILICULOSUS_GENOME
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* [[3.5.1.27-RXN]]
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***EC-NUMBER
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* [[S-FORMYLGLUTATHIONE-HYDROLASE-RXN]]
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* [[Ec-16_004740]]
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* [[FORMYLMETHIONINE-DEFORMYLASE-RXN]]
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** ESILICULOSUS_GENOME
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* [[RXN66-305]]
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***EC-NUMBER
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* [[RXN-13707]]
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== Pathways  ==
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* [[R147-RXN]]
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* [[PWY-6073]], alginate biosynthesis I (algal): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6073 PWY-6073]
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* [[FORMYLTHFDEFORMYL-RXN]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[DIOHBUTANONEPSYN-RXN]]
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* [[PWY-6082]], alginate biosynthesis II (bacterial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6082 PWY-6082]
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* [[1.14.13.70-RXN]]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[GTP-CYCLOHYDRO-II-RXN]]
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== Reconstruction information  ==
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== Reaction(s) of unknown directionality ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* CAS : 64-18-6
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21731 21731]
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* BIGG : 33693
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R00880 R00880]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=283 283]
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* UNIPROT:
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* HMDB : HMDB00142
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** [http://www.uniprot.org/uniprot/P11759 P11759]
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* LIGAND-CPD:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00058 C00058]
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{{#set: common name=NAD(P)-binding domain}}
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* CHEMSPIDER:
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{{#set: ec number=EC-1.1.1.132}}
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** [http://www.chemspider.com/Chemical-Structure.277.html 277]
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{{#set: gene associated=Ec-19_004880|Ec-16_004740}}
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* CHEBI:
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{{#set: in pathway=PWY-6073|PWY-6082}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15740 15740]
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{{#set: reconstruction category=annotation}}
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* METABOLIGHTS : MTBLC15740
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: smiles=[CH]([O-])=O}}
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{{#set: reconstruction source=esiliculosus_genome}}
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{{#set: inchi key=InChIKey=BDAGIHXWWSANSR-UHFFFAOYSA-M}}
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{{#set: common name=formate}}
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{{#set: molecular weight=45.018    }}
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{{#set: common name=formic acid}}
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{{#set: consumed by=FORMATETHFLIG-RXN}}
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{{#set: produced by=3.5.1.88-RXN|RXN3O-130|GTP-CYCLOHYDRO-I-RXN|RXN-13961|RXN-11881|RXN66-13|3.5.1.27-RXN|S-FORMYLGLUTATHIONE-HYDROLASE-RXN|FORMYLMETHIONINE-DEFORMYLASE-RXN|RXN66-305|RXN-13707|R147-RXN|FORMYLTHFDEFORMYL-RXN|DIOHBUTANONEPSYN-RXN|1.14.13.70-RXN|GTP-CYCLOHYDRO-II-RXN}}

Latest revision as of 19:48, 21 March 2018

Metabolite FORMATE

  • smiles:
    • [CH]([O-])=O
  • inchi key:
    • InChIKey=BDAGIHXWWSANSR-UHFFFAOYSA-M
  • common name:
    • formate
  • molecular weight:
    • 45.018
  • Synonym(s):
    • formic acid

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 64-18-6
  • BIGG : 33693
  • PUBCHEM:
  • HMDB : HMDB00142
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC15740
"CH]([O-])=O" cannot be used as a page name in this wiki.




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