Difference between revisions of "TREHALA-RXN"

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(Created page with "Category:Gene == Gene Ec-11_006010 == * left end position: ** 6018607 * transcription direction: ** NEGATIVE * right end position: ** 6018891 * centisome position: ** 95.6...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TREHALA-RXN TREHALA-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Six-hairpin glycosidase...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-11_006010 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TREHALA-RXN TREHALA-RXN] ==
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* left end position:
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* direction:
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** 6018607
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** Six-hairpin glycosidase-like
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* right end position:
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** Trehalase N-terminal fragment, family GH37
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** 6018891
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/3.2.1.28 EC-3.2.1.28]
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** 95.69053   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0031_0123
 
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** Esi0031_0123
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[DNA-DIRECTED-DNA-POLYMERASE-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[TREHALOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLC]][c] '''+''' 1 [[ALPHA-GLUCOSE]][c]
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***automated-name-match
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* With common name(s):
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* [[DNA-DIRECTED-RNA-POLYMERASE-RXN]]
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** 1 α,α-trehalose[c] '''+''' 1 H2O[c] '''=>''' 1 β-D-glucopyranose[c] '''+''' 1 α-D-glucopyranose[c]
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** esiliculosus_genome
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***go-term
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-00_010170]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-22_000080]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways ==
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* [[PWY0-1182]], trehalose degradation II (trehalase): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1182 PWY0-1182]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY0-1466]], trehalose degradation VI (periplasmic): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1466 PWY0-1466]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=6018607}}
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* LIGAND-RXN:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00010 R00010]
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{{#set: right end position=6018891}}
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* UNIPROT:
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{{#set: centisome position=95.69053    }}
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** [http://www.uniprot.org/uniprot/P19813 P19813]
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{{#set: common name=Esi_0031_0123|Esi0031_0123}}
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** [http://www.uniprot.org/uniprot/O43280 O43280]
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{{#set: reaction associated=DNA-DIRECTED-DNA-POLYMERASE-RXN|DNA-DIRECTED-RNA-POLYMERASE-RXN}}
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** [http://www.uniprot.org/uniprot/P13482 P13482]
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** [http://www.uniprot.org/uniprot/P32359 P32359]
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** [http://www.uniprot.org/uniprot/P32358 P32358]
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** [http://www.uniprot.org/uniprot/P35172 P35172]
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** [http://www.uniprot.org/uniprot/P62601 P62601]
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** [http://www.uniprot.org/uniprot/P32356 P32356]
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** [http://www.uniprot.org/uniprot/P48016 P48016]
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** [http://www.uniprot.org/uniprot/P78922 P78922]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Six-hairpin glycosidase-like}}
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{{#set: common name=Trehalase N-terminal fragment, family GH37}}
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{{#set: ec number=EC-3.2.1.28}}
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{{#set: gene associated=Ec-00_010170|Ec-22_000080}}
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{{#set: in pathway=PWY0-1182|PWY0-1466}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:48, 21 March 2018

Reaction TREHALA-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Six-hairpin glycosidase-like
    • Trehalase N-terminal fragment, family GH37
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 α,α-trehalose[c] + 1 H2O[c] => 1 β-D-glucopyranose[c] + 1 α-D-glucopyranose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1182, trehalose degradation II (trehalase): PWY0-1182
    • 2 reactions found over 2 reactions in the full pathway
  • PWY0-1466, trehalose degradation VI (periplasmic): PWY0-1466
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=TREHALA-RXN&oldid=29460"