Difference between revisions of "Ec-17 000820"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9654 RXN-9654] == * direction: ** LEFT-TO-RIGHT * common name: ** Beta-ketoacyl synthase, N-ter...")
 
(Created page with "Category:Gene == Gene Ec-17_000820 == * left end position: ** 722814 * transcription direction: ** NEGATIVE * right end position: ** 745557 * centisome position: ** 15.065...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9654 RXN-9654] ==
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== Gene Ec-17_000820 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 722814
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* common name:
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* transcription direction:
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** Beta-ketoacyl synthase, N-terminal
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** NEGATIVE
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** Thiolase-like, subgroup
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* right end position:
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** beta-ketoacyl synthase, partial
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** 745557
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** 3-oxoacyl-[acyl-carrier-protein] synthase
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* centisome position:
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* ec number:
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** 15.065068   
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
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* Synonym(s):
 
* Synonym(s):
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** Esi_0016_0114
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** Esi0016_0114
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** PDGH / PAT
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PGLYCDEHYDROG-RXN]]
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** 1 [[MALONYL-COA]][c] '''+''' 1 [[Myristoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[3-oxo-palmitoyl-ACPs]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 malonyl-CoA[c] '''+''' 1 a myristoyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 coenzyme A[c] '''+''' 1 a 3-oxo-palmitoyl-[acp][c]
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* Reaction: [[PSERTRANSAM-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[PSERTRANSAMPYR-RXN]]
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* [[Ec-12_000650]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: automated-name-match
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***GO-TERM
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== Pathways associated ==
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* [[Ec-27_003480]]
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* [[SERSYN-PWY]]
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** ESILICULOSUS_GENOME
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* [[PYRIDOXSYN-PWY]]
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***EC-NUMBER
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* [[Ec-12_000640]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-27_002090]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways ==
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* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
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** '''20''' reactions found over '''31''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=722814}}
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{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=Thiolase-like, subgroup}}
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{{#set: right end position=745557}}
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{{#set: common name=beta-ketoacyl synthase, partial}}
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{{#set: centisome position=15.065068    }}
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{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
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{{#set: common name=Esi_0016_0114|Esi0016_0114|PDGH / PAT}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: reaction associated=PGLYCDEHYDROG-RXN|PSERTRANSAM-RXN|PSERTRANSAMPYR-RXN}}
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{{#set: ec number=EC-2.3.1.85}}
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{{#set: pathway associated=SERSYN-PWY|PYRIDOXSYN-PWY}}
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{{#set: ec number=EC-2.3.1.41}}
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{{#set: gene associated=Ec-12_000650|Ec-27_003480|Ec-12_000640|Ec-27_002090}}
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{{#set: in pathway=PWY-5994}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 20:48, 21 March 2018

Gene Ec-17_000820

  • left end position:
    • 722814
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 745557
  • centisome position:
    • 15.065068
  • Synonym(s):
    • Esi_0016_0114
    • Esi0016_0114
    • PDGH / PAT

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-17_000820&oldid=29461"