Difference between revisions of "RXN1F-20"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PREPHENATE-ASP-TRANSAMINE-RXN PREPHENATE-ASP-TRANSAMINE-RXN] == * direction: ** REVERSIBLE * ec num...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-20 RXN1F-20] == * direction: ** LEFT-TO-RIGHT * common name: ** Magnesium chelatase subunit H...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PREPHENATE-ASP-TRANSAMINE-RXN PREPHENATE-ASP-TRANSAMINE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-20 RXN1F-20] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** Magnesium chelatase subunit H, putative chloroplast precursor
 +
** Magnesium chelatase subunit D, putative chloroplast precursor
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.6.1.78 EC-2.6.1.78]
+
** [http://enzyme.expasy.org/EC/6.6.1.1 EC-6.6.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-659]][c] '''+''' 1 [[OXALACETIC_ACID]][c] '''<=>''' 1 [[PREPHENATE]][c] '''+''' 1 [[L-ASPARTATE]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[PROTOPORPHYRIN_IX]][c] '''+''' 1 [[MG+2]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[MG-PROTOPORPHYRIN]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 3 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-arogenate[c] '''+''' 1 oxaloacetate[c] '''<=>''' 1 prephenate[c] '''+''' 1 L-aspartate[c]
+
** 1 H2O[c] '''+''' 1 protoporphyrin IX[c] '''+''' 1 Mg2+[c] '''+''' 1 ATP[c] '''=>''' 1 Mg-protoporphyrin[c] '''+''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 3 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-14_006490]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-02_001580]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-01_002840]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-aragem]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5531]], 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5531 PWY-5531]
 +
** '''4''' reactions found over '''9''' reactions in the full pathway
 +
* [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7159]], 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159]
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[gap-filling]]:
+
* Category: [[orthology]]
−
** [[meneco]]:
+
** Source: [[orthology-aragem]]
−
*** [[added for gapfilling]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20445 20445]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13961 13961]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01731 R01731]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03877 R03877]
−
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.6.1.78}}
+
{{#set: common name=Magnesium chelatase subunit H, putative chloroplast precursor}}
−
{{#set: in pathway=}}
+
{{#set: common name=Magnesium chelatase subunit D, putative chloroplast precursor}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: ec number=EC-6.6.1.1}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: gene associated=Ec-14_006490|Ec-02_001580|Ec-01_002840}}
−
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: in pathway=PWY-5531|CHLOROPHYLL-SYN|PWY-7159}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:49, 21 March 2018

Reaction RXN1F-20

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Magnesium chelatase subunit H, putative chloroplast precursor
    • Magnesium chelatase subunit D, putative chloroplast precursor
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5531, 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): PWY-5531
    • 4 reactions found over 9 reactions in the full pathway
  • CHLOROPHYLL-SYN, 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): CHLOROPHYLL-SYN
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-7159, 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): PWY-7159
    • 5 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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