Difference between revisions of "RXN-11717"

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(Created page with "Category:Gene == Gene Ec-26_006010 == * left end position: ** 6071767 * transcription direction: ** NEGATIVE * right end position: ** 6075984 * centisome position: ** 92.2...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11717 RXN-11717] == * direction: ** LEFT-TO-RIGHT * common name: ** Dihydroxy-acid/6-phosphoglu...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Ec-26_006010 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11717 RXN-11717] ==
* left end position:
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* direction:
** 6071767
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** LEFT-TO-RIGHT
* transcription direction:
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* common name:
** NEGATIVE
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** Dihydroxy-acid/6-phosphogluconate dehydratase
* right end position:
+
* ec number:
** 6075984
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** [http://enzyme.expasy.org/EC/4.2.1 EC-4.2.1]
* centisome position:
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** 92.22917   
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* Synonym(s):
 
* Synonym(s):
** Esi_0059_0058
 
** Esi0059_0058
 
  
== Reactions associated ==
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== Reaction Formula ==
* [[CERAMIDASE-RXN]]
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* With identifiers:
** esiliculosus_genome
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** 1 [[CPD-12673]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CPD-11020]][c]
***automated-name-match
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* With common name(s):
* [[CERAMIDASE-YEAST-RXN]]
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** 1 5-chloro-5-deoxy-D-ribonate[c] '''=>''' 1 H2O[c] '''+''' 1 5-chloro-4-hydroxy-2-oxopentanoate[c]
** esiliculosus_genome
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***automated-name-match
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== Genes associated with this reaction  ==
* [[RXN-11375]]
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Genes have been associated with this reaction based on different elements listed below.
** esiliculosus_genome
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* Gene: [[Ec-03_000220]]
***automated-name-match
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** Source: [[annotation-esiliculosus_genome]]
* [[RXN-13733]]
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*** Assignment: AUTOMATED-NAME-MATCH
** esiliculosus_genome
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== Pathways  ==
***automated-name-match
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* [[PWY-6627]], salinosporamide A biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6627 PWY-6627]
* [[RXN-646]]
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** '''2''' reactions found over '''15''' reactions in the full pathway
** [[pantograph]]-[[aragem]]
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== Reconstruction information  ==
== Pathways associated ==
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* Category: [[annotation]]
* [[PWY3DJ-11470]]
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** Source: [[annotation-esiliculosus_genome]]
* [[PWY-7128]]
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*** Tool: [[pathwaytools]]
* [[PWY-5033]]
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* [[PWY-6993]]
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* [[PWY-722]]
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* [[PWY-6483]]
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* [[PWY-7119]]
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* [[PWY66-388]]
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== External links  ==
 
== External links  ==
{{#set: left end position=6071767}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=Dihydroxy-acid/6-phosphogluconate dehydratase}}
{{#set: right end position=6075984}}
+
{{#set: ec number=EC-4.2.1}}
{{#set: centisome position=92.22917    }}
+
{{#set: gene associated=Ec-03_000220}}
{{#set: common name=Esi_0059_0058|Esi0059_0058}}
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{{#set: in pathway=PWY-6627}}
{{#set: reaction associated=CERAMIDASE-RXN|CERAMIDASE-YEAST-RXN|RXN-11375|RXN-13733|RXN-646}}
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{{#set: reconstruction category=annotation}}
{{#set: pathway associated=PWY3DJ-11470|PWY-7128|PWY-5033|PWY-6993|PWY-722|PWY-6483|PWY-7119|PWY66-388}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:50, 21 March 2018

Reaction RXN-11717

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Dihydroxy-acid/6-phosphogluconate dehydratase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 5-chloro-5-deoxy-D-ribonate[c] => 1 H2O[c] + 1 5-chloro-4-hydroxy-2-oxopentanoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6627, salinosporamide A biosynthesis: PWY-6627
    • 2 reactions found over 15 reactions in the full pathway

Reconstruction information

External links