Difference between revisions of "Ec-02 003060"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBULP3EPIM-RXN RIBULP3EPIM-RXN] == * direction: ** REVERSIBLE * common name: ** Ribulose-phosphate...")
 
(Created page with "Category:Gene == Gene Ec-02_003060 == * left end position: ** 3376797 * transcription direction: ** NEGATIVE * right end position: ** 3384855 * centisome position: ** 51.7...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBULP3EPIM-RXN RIBULP3EPIM-RXN] ==
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== Gene Ec-02_003060 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 3376797
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* common name:
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* transcription direction:
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** Ribulose-phosphate 3-epimerase-like
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/5.1.3.1 EC-5.1.3.1]
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** 3384855
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* centisome position:
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** 51.729553   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0209_0017
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** Esi0209_0017
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** DAGAT
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN]]
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** 1 [[RIBULOSE-5P]][c] '''<=>''' 1 [[XYLULOSE-5-PHOSPHATE]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 D-ribulose 5-phosphate[c] '''<=>''' 1 D-xylulose 5-phosphate[c]
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== Pathways associated ==
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* [[TRIGLSYN-PWY]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-07_002390]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-27_003930]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[P124-PWY]], Bifidobacterium shunt: [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY]
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** '''12''' reactions found over '''15''' reactions in the full pathway
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* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
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** '''13''' reactions found over '''13''' reactions in the full pathway
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* [[P21-PWY]], pentose phosphate pathway (partial): [http://metacyc.org/META/NEW-IMAGE?object=P21-PWY P21-PWY]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5723]], Rubisco shunt: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-1861]], formaldehyde assimilation II (RuMP Cycle): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1861 PWY-1861]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
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** '''13''' reactions found over '''18''' reactions in the full pathway
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* [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle): [http://metacyc.org/META/NEW-IMAGE?object=P185-PWY P185-PWY]
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** '''11''' reactions found over '''12''' reactions in the full pathway
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* [[NONOXIPENT-PWY]], pentose phosphate pathway (non-oxidative branch): [http://metacyc.org/META/NEW-IMAGE?object=NONOXIPENT-PWY NONOXIPENT-PWY]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[aragem]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=3376797}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13677 13677]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=3384855}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01529 R01529]
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{{#set: centisome position=51.729553    }}
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* UNIPROT:
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{{#set: common name=Esi_0209_0017|Esi0209_0017|DAGAT}}
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** [http://www.uniprot.org/uniprot/P40117 P40117]
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{{#set: reaction associated=DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q9CEB9 Q9CEB9]
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{{#set: pathway associated=TRIGLSYN-PWY}}
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** [http://www.uniprot.org/uniprot/P0AG07 P0AG07]
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** [http://www.uniprot.org/uniprot/Q9PI57 Q9PI57]
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** [http://www.uniprot.org/uniprot/Q9JUA9 Q9JUA9]
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** [http://www.uniprot.org/uniprot/P45455 P45455]
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** [http://www.uniprot.org/uniprot/Q43157 Q43157]
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** [http://www.uniprot.org/uniprot/Q43843 Q43843]
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** [http://www.uniprot.org/uniprot/P74061 P74061]
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** [http://www.uniprot.org/uniprot/O23782 O23782]
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** [http://www.uniprot.org/uniprot/P51012 P51012]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Ribulose-phosphate 3-epimerase-like}}
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{{#set: ec number=EC-5.1.3.1}}
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{{#set: gene associated=Ec-07_002390|Ec-27_003930}}
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{{#set: in pathway=P124-PWY|CALVIN-PWY|P21-PWY|PWY-5723|PWY-1861|P122-PWY|P185-PWY|NONOXIPENT-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:50, 21 March 2018

Gene Ec-02_003060

  • left end position:
    • 3376797
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3384855
  • centisome position:
    • 51.729553
  • Synonym(s):
    • Esi_0209_0017
    • Esi0209_0017
    • DAGAT

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-02_003060&oldid=29632"