Difference between revisions of "Ec-04 006300"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8665 RXN-8665] == * direction: ** LEFT-TO-RIGHT * common name: ** Indoleamine 2,3-dioxygenase *...")
 
(Created page with "Category:Gene == Gene Ec-04_006300 == * left end position: ** 6214439 * transcription direction: ** POSITIVE * right end position: ** 6223273 * centisome position: ** 95.4...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8665 RXN-8665] ==
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== Gene Ec-04_006300 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 6214439
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* common name:
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* transcription direction:
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** Indoleamine 2,3-dioxygenase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.13.11.11 EC-1.13.11.11]
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** 6223273
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** [http://enzyme.expasy.org/EC/1.13.11.52 EC-1.13.11.52]
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* centisome position:
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** 95.432755   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0134_0030
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** Esi0134_0030
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** PGDH
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PGLYCDEHYDROG-RXN]]
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** 1 [[TRP]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[N-FORMYLKYNURENINE]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 L-tryptophan[c] '''+''' 1 oxygen[c] '''=>''' 1 N-formylkynurenine[c]
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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* [[SERSYN-PWY]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-20_001720]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-7765]], 3-hydroxy-4-methyl-anthranilate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7765 PWY-7765]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5651]], L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5651 PWY-5651]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[TRPCAT-PWY]], L-tryptophan degradation I (via anthranilate): [http://metacyc.org/META/NEW-IMAGE?object=TRPCAT-PWY TRPCAT-PWY]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6309]], L-tryptophan degradation XI (mammalian, via kynurenine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309]
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** '''8''' reactions found over '''17''' reactions in the full pathway
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* [[PWY-7717]], 3-hydroxy-4-methyl-anthranilate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7717 PWY-7717]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=6214439}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24536 24536]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=6223273}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00678 R00678]
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{{#set: centisome position=95.432755    }}
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* UNIPROT:
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{{#set: common name=Esi_0134_0030|Esi0134_0030|PGDH}}
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** [http://www.uniprot.org/uniprot/P21643 P21643]
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{{#set: reaction associated=PGLYCDEHYDROG-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: pathway associated=SERSYN-PWY}}
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{{#set: common name=Indoleamine 2,3-dioxygenase}}
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{{#set: ec number=EC-1.13.11.11}}
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{{#set: ec number=EC-1.13.11.52}}
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{{#set: gene associated=Ec-20_001720}}
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{{#set: in pathway=PWY-7765|PWY-5651|TRPCAT-PWY|PWY-6309|PWY-7717}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 18:59, 21 March 2018

Gene Ec-04_006300

  • left end position:
    • 6214439
  • transcription direction:
    • POSITIVE
  • right end position:
    • 6223273
  • centisome position:
    • 95.432755
  • Synonym(s):
    • Esi_0134_0030
    • Esi0134_0030
    • PGDH

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-04_006300&oldid=23691"