Difference between revisions of "RXN0-5180"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14986 RXN-14986] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-isopropylmalate dehydroge...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5180 RXN0-5180] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/2.5...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14986 RXN-14986] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5180 RXN0-5180] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
−
** 3-isopropylmalate dehydrogenase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.85 EC-1.1.1.85]
+
** [http://enzyme.expasy.org/EC/2.5.1 EC-2.5.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-1130]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-3618]][c]
+
** 1 [[FARNESYL-PP]][c] '''+''' 1 [[DELTA3-ISOPENTENYL-PP]][c] '''<=>''' 1 [[CPD0-1028]][c] '''+''' 1 [[PPI]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 3-ethylmalate[c] '''+''' 1 NAD+[c] '''=>''' 1 NADH[c] '''+''' 1 CO2[c] '''+''' 1 2-oxovalerate[c]
+
** 1 (2E,6E)-farnesyl diphosphate[c] '''+''' 1 isopentenyl diphosphate[c] '''<=>''' 1 2-cis,6-trans,10-trans-geranylgeranyl diphosphate[c] '''+''' 1 diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-16_002120]]
+
* Gene: [[Ec-27_002140]]
−
** ESILICULOSUS_GENOME
+
** Source: [[orthology-aragem]]
−
***EC-NUMBER
+
* Gene: [[Ec-05_002690]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-17_003520]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-18_000990]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-08_002270]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-24_003910]]
 +
** Source: [[orthology-aragem]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7396]], butanol and isobutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7396 PWY-7396]
 
−
** '''1''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-aragem]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=3-isopropylmalate dehydrogenase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31282 31282]
−
{{#set: ec number=EC-1.1.1.85}}
+
* LIGAND-RXN:
−
{{#set: gene associated=Ec-16_002120}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R05555 R05555]
−
{{#set: in pathway=PWY-7396}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: ec number=EC-2.5.1}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: gene associated=Ec-27_002140|Ec-05_002690|Ec-17_003520|Ec-18_000990|Ec-08_002270|Ec-24_003910}}
−
{{#set: reconstruction source=esiliculosus_genome}}
+
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:50, 21 March 2018

Reaction RXN0-5180

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (2E,6E)-farnesyl diphosphate[c] + 1 isopentenyl diphosphate[c] <=> 1 2-cis,6-trans,10-trans-geranylgeranyl diphosphate[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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