Difference between revisions of "1.6.5.4-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERDEAM-RXN HOMOSERDEAM-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyridoxal phosp...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.6.5.4-RXN 1.6.5.4-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** monodehydroascorbate re...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERDEAM-RXN HOMOSERDEAM-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.6.5.4-RXN 1.6.5.4-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Pyridoxal phosphate-dependent transferase, major region, subdomain 1
+
** monodehydroascorbate reductase (NADH)
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.4.1.1 EC-4.4.1.1]
+
** [http://enzyme.expasy.org/EC/1.6.5.4 EC-1.6.5.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[HOMO-SER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[2-OXOBUTANOATE]][c]
+
** 1 [[NADH]][c] '''+''' 2 [[CPD-318]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[PROTON]][c] '''+''' 2 [[ASCORBATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-homoserine[c] '''=>''' 1 ammonium[c] '''+''' 1 2-oxobutanoate[c]
+
** 1 NADH[c] '''+''' 2 monodehydroascorbate radical[c] '''=>''' 1 NAD+[c] '''+''' 1 H+[c] '''+''' 2 L-ascorbate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-12_003100]]
+
* Gene: [[Ec-26_002470]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: GO-TERM
 +
** Source: [[orthology-aragem]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-22_003850]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
** Source: [[orthology-aragem]]
 +
** Source: [[orthology-aragem]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6370]], ascorbate recycling (cytosolic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6370 PWY-6370]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-aragem]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24923 24923]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14581 14581]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00095 R00095]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9S926 Q9S926]
 +
** [http://www.uniprot.org/uniprot/Q40977 Q40977]
 +
** [http://www.uniprot.org/uniprot/Q42711 Q42711]
 +
** [http://www.uniprot.org/uniprot/Q43497 Q43497]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Pyridoxal phosphate-dependent transferase, major region, subdomain 1}}
+
{{#set: common name=monodehydroascorbate reductase (NADH)}}
−
{{#set: ec number=EC-4.4.1.1}}
+
{{#set: ec number=EC-1.6.5.4}}
−
{{#set: gene associated=Ec-12_003100}}
+
{{#set: gene associated=Ec-26_002470|Ec-22_003850}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=PWY-6370}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
−
{{#set: reconstruction source=esiliculosus_genome}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:03, 21 March 2018

Reaction 1.6.5.4-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • monodehydroascorbate reductase (NADH)
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADH[c] + 2 monodehydroascorbate radical[c] => 1 NAD+[c] + 1 H+[c] + 2 L-ascorbate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6370, ascorbate recycling (cytosolic): PWY-6370
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=1.6.5.4-RXN&oldid=24241"