Difference between revisions of "PGLYCDEHYDROG-RXN"

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(Created page with "Category:Gene == Gene Ec-01_000060 == * left end position: ** 22384 * transcription direction: ** NEGATIVE * right end position: ** 25073 * centisome position: ** 0.216923...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGLYCDEHYDROG-RXN PGLYCDEHYDROG-RXN] == * direction: ** REVERSIBLE * common name: ** Phosphoglycera...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-01_000060 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGLYCDEHYDROG-RXN PGLYCDEHYDROG-RXN] ==
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* left end position:
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* direction:
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** 22384
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** REVERSIBLE
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* transcription direction:
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* common name:
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** NEGATIVE
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** Phosphoglycerate dehydrogenase / Phosphoserine aminotransferase
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* right end position:
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** D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain
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** 25073
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** Allosteric substrate binding domain
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* centisome position:
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* ec number:
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** 0.21692373   
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** [http://enzyme.expasy.org/EC/1.1.1.95 EC-1.1.1.95]
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0207_0005
 
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** Esi0207_0005
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[DIAMINOPIMDECARB-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[NAD]][c] '''+''' 1 [[G3P]][c] '''<=>''' 1 [[3-P-HYDROXYPYRUVATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
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***ec-number
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* With common name(s):
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== Pathways associated ==
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** 1 NAD+[c] '''+''' 1 3-phospho-D-glycerate[c] '''<=>''' 1 3-phospho-hydroxypyruvate[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
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* [[PWY-5097]]
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* [[PWY-2942]]
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== Genes associated with this reaction  ==
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* [[DAPLYSINESYN-PWY]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-2941]]
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* Gene: [[Ec-17_000820]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-04_006300]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-11_000960]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways ==
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* [[SERSYN-PWY]], L-serine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=SERSYN-PWY SERSYN-PWY]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=22384}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12641 12641]
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{{#set: right end position=25073}}
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* LIGAND-RXN:
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{{#set: centisome position=0.21692373    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01513 R01513]
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{{#set: common name=Esi_0207_0005|Esi0207_0005}}
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* UNIPROT:
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{{#set: reaction associated=DIAMINOPIMDECARB-RXN}}
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** [http://www.uniprot.org/uniprot/Q58424 Q58424]
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{{#set: pathway associated=PWY-5097|PWY-2942|DAPLYSINESYN-PWY|PWY-2941}}
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** [http://www.uniprot.org/uniprot/P43885 P43885]
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** [http://www.uniprot.org/uniprot/P35136 P35136]
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** [http://www.uniprot.org/uniprot/Q9PP40 Q9PP40]
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** [http://www.uniprot.org/uniprot/P0A9T0 P0A9T0]
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** [http://www.uniprot.org/uniprot/P40510 P40510]
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** [http://www.uniprot.org/uniprot/P40054 P40054]
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** [http://www.uniprot.org/uniprot/O49485 O49485]
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** [http://www.uniprot.org/uniprot/P87228 P87228]
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** [http://www.uniprot.org/uniprot/O04130 O04130]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Phosphoglycerate dehydrogenase / Phosphoserine aminotransferase}}
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{{#set: common name=D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain}}
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{{#set: common name=Allosteric substrate binding domain}}
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{{#set: ec number=EC-1.1.1.95}}
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{{#set: gene associated=Ec-17_000820|Ec-04_006300|Ec-11_000960}}
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{{#set: in pathway=SERSYN-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:51, 21 March 2018

Reaction PGLYCDEHYDROG-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Phosphoglycerate dehydrogenase / Phosphoserine aminotransferase
    • D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain
    • Allosteric substrate binding domain
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 3-phospho-D-glycerate[c] <=> 1 3-phospho-hydroxypyruvate[c] + 1 H+[c] + 1 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • SERSYN-PWY, L-serine biosynthesis: SERSYN-PWY
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PGLYCDEHYDROG-RXN&oldid=29746"