Difference between revisions of "RXN-14025"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=OLIGOSACCHARIDE-DIPHOSPHODOLICHOL OLIGOSACCHARIDE-DIPHOSPHODOLICHOL] == * common name: ** dolic...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14025 RXN-14025] == * direction: ** LEFT-TO-RIGHT * common name: ** 5'-nucleotidase * ec number...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=OLIGOSACCHARIDE-DIPHOSPHODOLICHOL OLIGOSACCHARIDE-DIPHOSPHODOLICHOL] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14025 RXN-14025] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** dolichyl diphosphooligosaccharide
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** 5'-nucleotidase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
 
* Synonym(s):
 
* Synonym(s):
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** a (glucosyl)3-(mannosyl)9-(N-acetylglucosaminyl)2-diphosphodolichol
 
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** a dolichyl diphosphooligosaccharide
 
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** an {α-D-glucosyl-(1->2)-α-D-glucosyl-(1->3)-α-D-glucosyl-(1->3)-α-D-mannosyl-(1->2)-α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1,6)]-α-D-mannosyl-(1,6)]-β-D-mannosyl-(1->4)-N-acetyl-β-D-glucosaminyl-(1->4)-N-acetyl-D-glucosaminyl}diphosphodolichol
 
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** a (glucosyl)3-(mannosyl)9-(N-acetylglucosaminyl)2-PP-Dol
 
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** (glucosyl)3-(mannosyl)9-(N-acetylglucosaminyl)2-PP-Dol
 
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** {α-D-glucosyl-(1->2)-α-D-glucosyl-(1->3)-α-D-glucosyl-(1->3)-α-D-mannosyl-(1->2)-α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1,6)]-α-D-mannosyl-(1,6)]-β-D-mannosyl-(1->4)-N-acetyl-β-D-glucosaminyl-(1->4)-N-acetyl-D-glucosaminyl}diphosphodolichol
 
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** an oligosaccharide-diphosphodolichol
 
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** (glucosyl)3-(mannosyl)9-(N-acetylglucosaminyl)2-diphosphodolichol
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 1 [[UMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[URIDINE]][c] '''+''' 1 [[Pi]][c]
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* [[RXN-16761]]
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* With common name(s):
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** 1 UMP[c] '''+''' 1 H2O[c] '''=>''' 1 uridine[c] '''+''' 1 phosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-12_005060]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-15_000820]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-05_000950]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-7185]], UTP and CTP dephosphorylation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7185 PWY-7185]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=dolichyl diphosphooligosaccharide}}
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* RHEA:
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{{#set: common name=a (glucosyl)3-(mannosyl)9-(N-acetylglucosaminyl)2-diphosphodolichol|a dolichyl diphosphooligosaccharide|an {α-D-glucosyl-(1->2)-α-D-glucosyl-(1->3)-α-D-glucosyl-(1->3)-α-D-mannosyl-(1->2)-α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1,6)]-α-D-mannosyl-(1,6)]-β-D-mannosyl-(1->4)-N-acetyl-β-D-glucosaminyl-(1->4)-N-acetyl-D-glucosaminyl}diphosphodolichol|a (glucosyl)3-(mannosyl)9-(N-acetylglucosaminyl)2-PP-Dol|(glucosyl)3-(mannosyl)9-(N-acetylglucosaminyl)2-PP-Dol|{α-D-glucosyl-(1->2)-α-D-glucosyl-(1->3)-α-D-glucosyl-(1->3)-α-D-mannosyl-(1->2)-α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1,6)]-α-D-mannosyl-(1,6)]-β-D-mannosyl-(1->4)-N-acetyl-β-D-glucosaminyl-(1->4)-N-acetyl-D-glucosaminyl}diphosphodolichol|an oligosaccharide-diphosphodolichol|(glucosyl)3-(mannosyl)9-(N-acetylglucosaminyl)2-diphosphodolichol}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29360 29360]
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{{#set: consumed or produced by=RXN-16761}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=5'-nucleotidase}}
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{{#set: ec number=EC-3.1.3.5}}
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{{#set: gene associated=Ec-12_005060|Ec-15_000820|Ec-05_000950}}
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{{#set: in pathway=PWY-7185}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:03, 21 March 2018

Reaction RXN-14025

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 5'-nucleotidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 UMP[c] + 1 H2O[c] => 1 uridine[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7185, UTP and CTP dephosphorylation I: PWY-7185
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-14025&oldid=24249"