Difference between revisions of "PYRIDOXKIN-RXN"

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(Created page with "Category:Gene == Gene Ec-16_001260 == * left end position: ** 1402802 * transcription direction: ** POSITIVE * right end position: ** 1407748 * centisome position: ** 26.2...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXKIN-RXN PYRIDOXKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyridoxamine kina...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-16_001260 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXKIN-RXN PYRIDOXKIN-RXN] ==
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* left end position:
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* direction:
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** 1402802
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** Pyridoxamine kinase
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* right end position:
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* ec number:
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** 1407748
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** [http://enzyme.expasy.org/EC/2.7.1.35 EC-2.7.1.35]
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* centisome position:
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** 26.281246   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0194_0049
 
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** Esi0194_0049
 
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** CRY1
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[PYRIDOXAL]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PYRIDOXAL_PHOSPHATE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
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***go-term
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* With common name(s):
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== Pathways associated ==
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** 1 pyridoxal[c] '''+''' 1 ATP[c] '''=>''' 1 pyridoxal 5'-phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-02_001230]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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== Pathways ==
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* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PLPSAL-PWY PLPSAL-PWY]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=1402802}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10224 10224]
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{{#set: right end position=1407748}}
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* LIGAND-RXN:
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{{#set: centisome position=26.281246    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00174 R00174]
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{{#set: common name=Esi_0194_0049|Esi0194_0049|CRY1}}
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* UNIPROT:
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{{#set: reaction associated=DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q7M2L1 Q7M2L1]
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** [http://www.uniprot.org/uniprot/P44690 P44690]
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** [http://www.uniprot.org/uniprot/P77150 P77150]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Pyridoxamine kinase}}
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{{#set: ec number=EC-2.7.1.35}}
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{{#set: gene associated=Ec-02_001230}}
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{{#set: in pathway=PWY-7204|PWY-7282|PLPSAL-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:51, 21 March 2018

Reaction PYRIDOXKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Pyridoxamine kinase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7204, pyridoxal 5'-phosphate salvage II (plants): PWY-7204
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-7282, 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): PWY-7282
    • 5 reactions found over 9 reactions in the full pathway
  • PLPSAL-PWY, pyridoxal 5'-phosphate salvage I: PLPSAL-PWY
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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