Difference between revisions of "Ec-10 000880"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSII-RXN PSII-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Photosystem II Pbs27 * ec num...")
 
(Created page with "Category:Gene == Gene Ec-10_000880 == * left end position: ** 965607 * transcription direction: ** POSITIVE * right end position: ** 971432 * centisome position: ** 14.853...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSII-RXN PSII-RXN] ==
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== Gene Ec-10_000880 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 965607
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* common name:
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* transcription direction:
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** Photosystem II Pbs27
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.10.3.9 EC-1.10.3.9]
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** 971432
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* centisome position:
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** 14.853242   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0138_0072
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** Esi0138_0072
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[F16ALDOLASE-RXN]]
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** 4 [[PROTON]][e] '''+''' 1 [[Light]][c] '''+''' 2 [[WATER]][c] '''+''' 2 [[PLASTOQUINONE]][c] '''=>''' 2 [[Plastoquinols]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 4 [[PROTON]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 4 H+[e] '''+''' 1 hν[c] '''+''' 2 H2O[c] '''+''' 2 a plastoquinone[c] '''=>''' 2 a plastoquinol[c] '''+''' 1 oxygen[c] '''+''' 4 H+[c]
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* Reaction: [[RXN-8631]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: go-term
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Ec-02_005010]]
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* [[PWY-1042]]
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** ESILICULOSUS_GENOME
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* [[P341-PWY]]
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***AUTOMATED-NAME-MATCH
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* [[PWY66-373]]
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== Pathways  ==
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* [[GLUCONEO-PWY]]
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* [[PWY-101]], photosynthesis light reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY-101 PWY-101]
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* [[GLYCOLYSIS]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[SUCSYN-PWY]]
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== Reconstruction information  ==
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* [[PWY-7385]]
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* [[annotation]]:
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* [[ANAGLYCOLYSIS-PWY]]
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** [[pathwaytools]]:
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* [[CALVIN-PWY]]
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*** [[esiliculosus_genome]]
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* [[PWY-1861]]
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* [[PWY-6142]]
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* [[PWY-5484]]
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* [[P185-PWY]]
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* [[PWY66-399]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=965607}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30250 30250]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=971432}}
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{{#set: common name=Photosystem II Pbs27}}
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{{#set: centisome position=14.853242    }}
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{{#set: ec number=EC-1.10.3.9}}
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{{#set: common name=Esi_0138_0072|Esi0138_0072}}
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{{#set: gene associated=Ec-02_005010}}
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{{#set: reaction associated=F16ALDOLASE-RXN|RXN-8631}}
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{{#set: in pathway=PWY-101}}
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{{#set: pathway associated=PWY-1042|P341-PWY|PWY66-373|GLUCONEO-PWY|GLYCOLYSIS|SUCSYN-PWY|PWY-7385|ANAGLYCOLYSIS-PWY|CALVIN-PWY|PWY-1861|PWY-6142|PWY-5484|P185-PWY|PWY66-399}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:52, 21 March 2018

Gene Ec-10_000880

  • left end position:
    • 965607
  • transcription direction:
    • POSITIVE
  • right end position:
    • 971432
  • centisome position:
    • 14.853242
  • Synonym(s):
    • Esi_0138_0072
    • Esi0138_0072

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-10_000880&oldid=29956"