Difference between revisions of "Ec-12 005070"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN] == * direction: ** LEFT-...")
 
(Created page with "Category:Gene == Gene Ec-12_005070 == * left end position: ** 4640795 * transcription direction: ** NEGATIVE * right end position: ** 4660342 * centisome position: ** 55.6...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN] ==
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== Gene Ec-12_005070 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4640795
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* common name:
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* transcription direction:
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** Pyridoxal-dependent decarboxylase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/4.1.2.27 EC-4.1.2.27]
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** 4660342
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* centisome position:
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** 55.671375   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0287_0021
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** Esi0287_0021
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[VALINE--TRNA-LIGASE-RXN]]
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** 1 [[CPD-649]][c] '''=>''' 1 [[PHOSPHORYL-ETHANOLAMINE]][c] '''+''' 1 [[PALMITALDEHYDE]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 sphinganine 1-phosphate[c] '''=>''' 1 O-phosphoethanolamine[c] '''+''' 1 palmitaldehyde[c]
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== Pathways associated ==
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* [[TRNA-CHARGING-PWY]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-03_002920]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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== Pathways ==
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* [[PWY-7119]], sphingolipid recycling and degradation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7119 PWY-7119]
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** '''4''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[aragem]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4640795}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18594 18594]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=4660342}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02464 R02464]
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{{#set: centisome position=55.671375    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0287_0021|Esi0287_0021}}
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{{#set: common name=Pyridoxal-dependent decarboxylase}}
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{{#set: reaction associated=VALINE--TRNA-LIGASE-RXN}}
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{{#set: ec number=EC-4.1.2.27}}
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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{{#set: gene associated=Ec-03_002920}}
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{{#set: in pathway=PWY-7119}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 20:53, 21 March 2018

Gene Ec-12_005070

  • left end position:
    • 4640795
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4660342
  • centisome position:
    • 55.671375
  • Synonym(s):
    • Esi_0287_0021
    • Esi0287_0021

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-12_005070&oldid=30004"